Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1712 aTGGCAGACACTAATAACTATCACATTGATGAGCAAGAAAAACAAGTAGTAGAAGATGAAGGCTCTTCAGTGCCAATAAGAACCAAACACTACTCTTCATATTATGGCTGCACATTCTGCAAGAGAGGCTTCACCAAGGCACAAGCATTAGGAGGCCACATGAACATCCACAGAAAACACAAATCATTGATAATGAAGAAGAAGGGATCAAAGCAATTATTAGAGGATGAGAATATTGGAGGTGGCAATTTGAGTCTCCAAGTTGGTCCAACTCATTTGGAGGAGGAAAATGGTGAAGTTGACTTGGAGCTTAGACTTGGTCACTATCCAcagtaa 336 0.3988 MADTNNYHIDEQEKQVVEDEGSSVPIRTKHYSSYYGCTFCKRGFTKAQALGGHMNIHRKHKSLIMKKKGSKQLLEDENIGGGNLSLQVGPTHLEEENGEVDLELRLGHYPQ 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1712 111 SUPERFAMILY beta-beta-alpha zinc fingers 33 62 IPR036236 -
Sto12g1712 111 ProSitePatterns Zinc finger C2H2 type domain signature. 37 57 IPR013087 -
Sto12g1712 111 Gene3D Classic Zinc Finger 10 87 - -
Sto12g1712 111 PANTHER OS07G0101800 PROTEIN 10 64 - -
Sto12g1712 111 Pfam C2H2-type zinc finger 34 59 - -
Sto12g1712 111 MobiDBLite consensus disorder prediction 1 23 - -
Sto12g1712 111 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 62 IPR013087 -
Sto12g1712 111 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 10 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1712 Sto-Chr12 12727668 12728192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1712 35 61 C2H2 Transcription Factor Family AT5G43540 81.481 1.45e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1712 - - osa:107278618 85.8853