Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto12g1704 | ATGGTATGGGCGACGGACGAGAAGGTCACCAAGTTCTGCACATGGGATCCCTACACCAGCAGGGACGACGCCGTGAACTTCATCGCCAACGTCGCGACCCAATTCCTGTGGTTCAGAGCGATTTGCCTCAACGATCGCGCGATTGGATCGATCTCGGTGTGCTCCTACGCGGGCGGCGATAAGTGCAGAGGGAAATCGGGGGAGATTGGGTATGTTTTGGGGTCCAAGTATTGGGGAAAGGGGATAGCGACGAAGGCCGTGAAAGAGAGCGTAGGCGTTGTGTTCGATGAAATGCGTGAGTTGGAGAGGGTGGAGGCTTTGGTGGATGTGGAGAATGTGAGGTCTCAGAGAGTTCTTCAGAAGTGTGGGTTTCAGAGAGAGGGAGTTTTGAGGAAGTATTTGTTTGTTAAAGGGAAGAGTAGGGATAGGGTGATGTTCAGTATTCTTTCATCTGAATTTGGAAGGGAGACAGAGATAGAAGGTAAGATCCTGAATCCTTTAGAAGAAGGACAAACTCAAGTGGCAAGGAAGCAAATAGAAGTCTACCAGGCAGTAAGGAAAAGCAAGATGGCGAGAAAAGAAAGGATGGATACAGGAGAAGATAGAATGGAGAAGACGACACTGGAAGGAGAAACAATAGAATTAGgtgaagaaagagataaaaCTATAGAAGTTACAAAGCATGCACTAGTGAGGAGAGTAATCGCGCCGAAGCCACTCAATAGAAGGACAGTCAGAACAATGTTAATTAAAAGTTGGGGTTATCCAAAAGGAATACACATTGTGGATTTATCTActaatacttttttattcaatttcaatGAAGCCAATACCCCAAGAAGGATCATGGAAGAGGCGCCATGGAACGTGATGGGTTATCTCATAAGCTTGCAGAGGTGGGTGCTAGAAGTAACAATACACGAGGTGAGTTATGATTATTCACCGTTCTGGATTCAAATACATGGTGTTCCCCTTCAAGGATATTCAGAGGAGAATGCAATAAAAATAGCAAAGAAAATAGGAGAAGTGCTGAATGTAGAAAATCCTATAGTAGATAACAAAATAATTCGAGGCTTTTTGCACGTTCGTGTCCTCATCAATATAAAGGAACCACTCATCACCAGTTTCTGGGTCCCACGTGGAAATCTTCCGAAAACTTGGGTGGctttatattatgaaaaattaCAGGATTATTGTTATAATTGCGGCAGAATTGGGCATGAACAAAAGGATTGTAAAGAGGAGAAAGCAATGGCGCATTGGGATCCAAGTGTTCCTCGGTATGGTCCAGGATTAGGGGTGCCGCCGGCGAAGACATTAGCATCGGTGATAGCAGAAATGAAGCAAGTACAGAAGGGAGAAAGTAgcagagaaaaggaaaaaggtGAACACGTGGCAATGGAAAAAGACAAGAGTAGAGTTTCACAAAAAATTGGAGTCTCAGAGTATTGgaaagtgaaggaaaaagatATGGAAATGATTGAAAAACTACAGTGGAAGGTAAGGAGAGGCGAAATGACAGAGCAAATGGAGCTGGAGCAGGCGGCGGAGATAAGACATCAAAATGACATTGGAAAAGATATTCAAAGTGAAAAAGCTGCAGAAGAAAAGCTAAGTGGGTTTAGAGGAGATAAAGCAAGAATTAAAATAGCAGAGGCCCATTTTGACACCAAAGCCCAAATCTTAACAAGAATTGATTTGAGGGAGGAAAGAATAAGAGCTGGTCTTGGCCCAAAACATTTGGACCAACTGGATTTAGAACCGAAACACATTGGTTTAAAAATACCAATGATTATAACTGAATCAATGAGTCCAACATGTGCAGCTAGCAGCGAGCAGAGGACTAATGAAGGCCCAATAAAACTGGATTACCCATTATCTCAAGAAGAAATAAGAAGATGCAGAGAAGTTCCTACAAAGGAAAATACTACAGGGCGGCGCAATGAAatgtttgaagaagaaaatggtAGAAACCTTGCATTGTGTGTATGGGAGCCAAGAGAGAAACCAAAAAATGACGAAGGGGAATACTATACTGTGGAGCTACCACCGGAAGATGATAACGaaggtgaagaagaaagaaaggaggaaaagaaagagaatgatatGGAAGCCATAGTAATCACTGAAATTACAAACCGCCTGTCACTTAAGAGACCaagaaaagaggagaagaatGAAGACGACGGGGTAGAAGTAAATGAGGATAGCTTGGAGATGGAGGACGATGAATGCCGAATCACAACAATAAAGAGACAAAAGGCCGAGGAGGCGGGCCTAATCATGCCCCCACAGGCAAGAAAGAGGAAGGTGGAGaatttaaaaaggaaattgTGTTTCGACGATGTTTTTGTTGTTGAAGCTGAAGGAAGATCAGGAGGATTAGCTATCTTATGGAAGAAGGAGATACAGATATCTCGTTTATATCATCCTCGTAACGCTCCTTGGTGTTGCGTTGGATACTTCAATGAGATATTGAGTCAAAGTGAGAAGGAGGGAGTTTGCCTGCATAGTCAAAATCAGATTGATGTCTTTAGAAGCTTCATTGATCAAAACTGTCTTATTGATCTTCCTCTAAAGGGTTGTAGATTCACCTGGTCTAACAACAGAGAACAAGGCTGTGTCAAGGAGAAGATAGATCGGGTGCTTGCCAATAGAAAGTGGTTAAACATGTTTCCTAATGCTGTGATTAATGCGTTACCAGCAATCGGTTCAGATCATTCTCCGCTAGTAGTTATGCTTAATCCGATATTTGTATAG | 2760 | 0.4047 | MVWATDEKVTKFCTWDPYTSRDDAVNFIANVATQFLWFRAICLNDRAIGSISVCSYAGGDKCRGKSGEIGYVLGSKYWGKGIATKAVKESVGVVFDEMRELERVEALVDVENVRSQRVLQKCGFQREGVLRKYLFVKGKSRDRVMFSILSSEFGRETEIEGKILNPLEEGQTQVARKQIEVYQAVRKSKMARKERMDTGEDRMEKTTLEGETIELGEERDKTIEVTKHALVRRVIAPKPLNRRTVRTMLIKSWGYPKGIHIVDLSTNTFLFNFNEANTPRRIMEEAPWNVMGYLISLQRWVLEVTIHEVSYDYSPFWIQIHGVPLQGYSEENAIKIAKKIGEVLNVENPIVDNKIIRGFLHVRVLINIKEPLITSFWVPRGNLPKTWVALYYEKLQDYCYNCGRIGHEQKDCKEEKAMAHWDPSVPRYGPGLGVPPAKTLASVIAEMKQVQKGESSREKEKGEHVAMEKDKSRVSQKIGVSEYWKVKEKDMEMIEKLQWKVRRGEMTEQMELEQAAEIRHQNDIGKDIQSEKAAEEKLSGFRGDKARIKIAEAHFDTKAQILTRIDLREERIRAGLGPKHLDQLDLEPKHIGLKIPMIITESMSPTCAASSEQRTNEGPIKLDYPLSQEEIRRCREVPTKENTTGRRNEMFEEENGRNLALCVWEPREKPKNDEGEYYTVELPPEDDNEGEEERKEEKKENDMEAIVITEITNRLSLKRPRKEEKNEDDGVEVNEDSLEMEDDECRITTIKRQKAEEAGLIMPPQARKRKVENLKRKLCFDDVFVVEAEGRSGGLAILWKKEIQISRLYHPRNAPWCCVGYFNEILSQSEKEGVCLHSQNQIDVFRSFIDQNCLIDLPLKGCRFTWSNNREQGCVKEKIDRVLANRKWLNMFPNAVINALPAIGSDHSPLVVMLNPIFV | 919 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto12g1704 | 919 | Pfam | Domain of unknown function (DUF4283) | 221 | 348 | IPR025558 | - | |
| Sto12g1704 | 919 | SUPERFAMILY | DNase I-like | 794 | 915 | IPR036691 | - | |
| Sto12g1704 | 919 | Pfam | Zinc knuckle | 370 | 413 | IPR025836 | - | |
| Sto12g1704 | 919 | PANTHER | ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN | 1 | 153 | - | - | |
| Sto12g1704 | 919 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 3 | 149 | IPR016181 | - | |
| Sto12g1704 | 919 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 1 | 142 | IPR000182 | GO:0016407 | |
| Sto12g1704 | 919 | MobiDBLite | consensus disorder prediction | 670 | 706 | - | - | |
| Sto12g1704 | 919 | MobiDBLite | consensus disorder prediction | 451 | 471 | - | - | |
| Sto12g1704 | 919 | Gene3D | - | 1 | 155 | - | - | |
| Sto12g1704 | 919 | Pfam | Acetyltransferase (GNAT) domain | 3 | 125 | IPR000182 | GO:0016407 | |
| Sto12g1704 | 919 | Gene3D | Endonuclease/exonuclease/phosphatase | 798 | 914 | IPR036691 | - | |
| Sto12g1704 | 919 | ProSiteProfiles | Zinc finger CCHC-type profile. | 399 | 414 | IPR001878 | GO:0003676|GO:0008270 | |
| Sto12g1704 | 919 | PANTHER | ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN | 1 | 153 | - | - | |
| Sto12g1704 | 919 | MobiDBLite | consensus disorder prediction | 719 | 738 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto12g1704 | Sto-Chr12 | 12600828 | 12607565 | Dispersed/Transposed |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | GNAT | Sto12g1704 | DUF4283 | 1.7e-26 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto12g1704 | - | - | lja:Lj2g3v3007480.1 | 258.84 |