Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1694 ATGGAAACCCCCAAGGTGATTTCATACGGGAACAACGATCTCAACCTCAAGGACACGGAGTTGAGATTAGGGTTACCGGGAACGGAGGATAAGAGGGATGATTCCACTACTACTACTGCTTCTGCTTCTGGGGTTATTATCAACAACAAGAGGCCCTTGCCTTCGGCGGAAAACTTTGGATCGAAGGGAGGATCTGATGGTGATGACGCCGATTCGGCCCCTCCTTCCAAGGCGAAGATTGTGGGGTGGCCTCCGATTAGAAACTATAGGAAGAATAGTCTGCAGCAGAATGAAGGCGAGAGTGGTGGGATCTATGTGAAAGTGAGTATGGATGGAGCTCCGTACCTCAGGAAGATTGATTTGAGGGTTTACAATGAGTATCCGGAACTCCTCAAAGCTCTAGAACACATGTTCAAACTTACCATAGGTCAGTACAATGAAAGAGAAGGTTACAAAGGGTCAGATTTTGCTCCCACATATGAAGACAAGGATGGTGACTGGATGCTTGTTGGAGATGTTCCATGGGATATGTTTGTGACTTCCTGCAAAAGACTAAGAATCATGAAAGGGTCAGAAGCCAGAGGATTGGGTTGTGGAGTATga 603 0.466 METPKVISYGNNDLNLKDTELRLGLPGTEDKRDDSTTTTASASGVIINNKRPLPSAENFGSKGGSDGDDADSAPPSKAKIVGWPPIRNYRKNSLQQNEGESGGIYVKVSMDGAPYLRKIDLRVYNEYPELLKALEHMFKLTIGQYNEREGYKGSDFAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGLGCGV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1694 200 Gene3D - 97 200 - -
Sto12g1694 200 PANTHER AUXIN-INDUCED PROTEIN 13 197 - -
Sto12g1694 200 MobiDBLite consensus disorder prediction 20 82 - -
Sto12g1694 200 Pfam AUX/IAA family 67 197 IPR033389 -
Sto12g1694 200 ProSiteProfiles PB1 domain profile. 103 190 IPR000270 GO:0005515
Sto12g1694 200 SUPERFAMILY CAD & PB1 domains 97 189 - -
Sto12g1694 200 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 13 197 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1694 Sto-Chr12 12474805 12475845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1694 84 196 B3 DNA Binding Superfamily AT2G46530 34.513 6.10e-11 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Sto12g1694 AUX_IAA 5e-54 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1694 K14484 - qsu:112011057 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1694 12 12474805 12475845 Sto12g1694 12 12474805 12475845 ECH