Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1686 ATGGATGTGTTCTCCTTTGGGGTGGTCTTGCTTGAACTCATCACAGGTAGAGAAGCCATTGATGAGGGAGGGAACCTCCTGTGGACAAGTGCATTGAGGACTTTTGATCATGTGGGTAATGAGCAAGAGAAAGGTAGGAGATTGAGGGAATGGTTGGATAGTAGCATCATGAGGGAGACAAACTCATTGGAGAGCTTGGTGAGTGTGCTTAATATTGCTCTTGCTTGTTTGCACAGGGATCCCACAAAGAGACCAAGCATGGTGGATATTGTGTATGCATTGTGTAAAAGTGAAGATACAGGCTTTGATACCTCTGATGATGGGATAGGTTCCCCTTTGTTGTTGGCCAGGTGA 354 0.4576 MDVFSFGVVLLELITGREAIDEGGNLLWTSALRTFDHVGNEQEKGRRLREWLDSSIMRETNSLESLVSVLNIALACLHRDPTKRPSMVDIVYALCKSEDTGFDTSDDGIGSPLLLAR 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1686 117 Gene3D Transferase(Phosphotransferase) domain 1 1 107 - -
Sto12g1686 117 PANTHER OS02G0681700 PROTEIN 1 110 - -
Sto12g1686 117 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 1 110 - -
Sto12g1686 117 SUPERFAMILY Protein kinase-like (PK-like) 2 94 IPR011009 -
Sto12g1686 117 ProSiteProfiles Protein kinase domain profile. 1 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1686 Sto-Chr12 12384563 12384916 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1686 1 116 Receptor kinase-like Gene Family AT5G25930 33.613 1.69e-12 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sto12g1686 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1686 - - lja:Lj0g3v0015599.1 181.8