Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1649 ATGCTAGTAGGTCGAGGTAGCTTCGCGAAGGTTTATCAAGCTCGATCGTTAATCGATGGAAGCACCGTGGCCGTTAAGATCATCGACAAGTCCAAAACCGACGCCGCCATGGAGCCTCGAATCATCCGCGAAGTGGACGCTATGCGTCGCCTTCAGGATCACCCGAACATCCTCCGAATCCAAGAAGTGATGGCGACGAAGACCAAGATCTACCTCATCGTGGAGTTCGCCGCCGGCGGAGAGCTCTTCTCGAGGATCTCGCGCAAGGGGAAGATGACGGAGCCGGTGGCGAGGCGCTACTTCCAGCAATTGGTCTCCGCGATGTGCTTCTGCCACCGAAACGGCGTCGCTCACCGCGACGTCAAGCCGCAGAATCTCCTGCTGGACAGCGAGGGGAATCTCAAGGTCTCCGACTTCGGGCTCTCCGCCTTGCCCGAGCAGCTCAAAAACGGCTTGCTCCACACGGCTTGCGGCACGCCGGCTTACACGGCGCCGGAGATCCTCTGCCGGCGCAGCTACGACGGCTCCAAAGCCGACGCGTGGTCCTGCGGCCTCATCCTCTACGTTCTACTCGCCGGATACCTCCCCTTCTCCGACGCCAACATCCCGGACATGTGCAAAAAGATCAGCCGCCGGGATTACCAGTTCCCGGAGTGGATCTCCAAGCCGGCGCGATTCGTGATCCACCGGTTACTCGACCCGAACCCGAAGACCCGGATGAGCCTCGAATCCCTCTTCCAAAACTCGTGGTTCAAGAAATCGCTGAAGATCCGACCCGAGGAGAGCGTATTCGAGTCGGGTCCGAACGCGAAGTGGTACAAGAAAGAGGAGACAATGGGTTCGGGTGTGAACGCGTTTGACATAATATCGATGTCGTCGGGTTTGGATTTGAGCGGGTTGTTTGAAACGACGTCGGATGGGAAGAGGATGAGTGAGAAGAGGTTCACATCTCAGGCGTCGTTGGAAGTAGTGGAAGAGAGAGTGAAGGAGATAggtggggttttggggttcagaGTTGAGATTGCAAAGAATGGAGCAATTGGGTTAGGGAAAGGGAAGGTCATTTTGGTCATTGAAGTCTTGGAGATTGTTCCTAAATTGCTTTTGGTGGCAGTGAAAGTGATGGATGGTGGTTTGGAGTTTGAACAATTTCATTGGCAAGATTGGAAGCTTGGGCTTCAAGATATTGTTGTGTCATGGCACAACAATAATGAATCACTCTGA 1224 0.5376 MLVGRGSFAKVYQARSLIDGSTVAVKIIDKSKTDAAMEPRIIREVDAMRRLQDHPNILRIQEVMATKTKIYLIVEFAAGGELFSRISRKGKMTEPVARRYFQQLVSAMCFCHRNGVAHRDVKPQNLLLDSEGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTAPEILCRRSYDGSKADAWSCGLILYVLLAGYLPFSDANIPDMCKKISRRDYQFPEWISKPARFVIHRLLDPNPKTRMSLESLFQNSWFKKSLKIRPEESVFESGPNAKWYKKEETMGSGVNAFDIISMSSGLDLSGLFETTSDGKRMSEKRFTSQASLEVVEERVKEIGGVLGFRVEIAKNGAIGLGKGKVILVIEVLEIVPKLLLVAVKVMDGGLEFEQFHWQDWKLGLQDIVVSWHNNNESL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1649 407 Pfam NAF domain 283 340 IPR004041 GO:0007165
Sto12g1649 407 SMART serkin_6 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1649 407 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 403 - -
Sto12g1649 407 ProSitePatterns Protein kinases ATP-binding region signature. 3 26 IPR017441 GO:0005524
Sto12g1649 407 Gene3D Kinase associated domain 1, KA1 285 399 - -
Sto12g1649 407 ProSiteProfiles NAF domain profile. 278 302 IPR018451 GO:0007165
Sto12g1649 407 Gene3D Transferase(Phosphotransferase) domain 1 1 284 - -
Sto12g1649 407 Pfam Protein kinase domain 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1649 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
Sto12g1649 407 CDD CIPK_C 284 394 - -
Sto12g1649 407 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1649 407 PANTHER SERINE/THREONINE KINASE 2 403 - -
Sto12g1649 407 SUPERFAMILY Protein kinase-like (PK-like) 3 262 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1649 Sto-Chr12 12021348 12023196 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1649 3 402 CBL-interacting serine-threonine protein kinases AT4G14580 59.705 2.10e-163 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto12g1649 Pkinase 2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1649 K12761 - gmx:100784173 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1649 12 12021348 12023196 Sto12g1649 12 12021348 12023196 ECH