Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1646 atggcggTGATCAATAGATCAAATCATCAAACGATCAAGTGGTGGAAGGATGGACTCATAGGTCGAGGTAGCTTCGCGAAGGTCTATCAAGCACGATCCTTAATCGATGGAAGCACCGTGGCCGTTAAGATCATCGACAAGTCCAAAACCGACGCCGCCATGGAGCCTCGAATCATCCGCGAAGTGGACGCTATGCGTCGCCTTCAGGATCACCCGAACATCCTCCGAATCCAAGAAGTGATGGCGACGAAGACCAAGATCTACCTCATCGTGGAGTTCGCCGCCGGCGGAGAGCTCTTCTCGAGGATCTCGCGCAAGGGGAAGATGACGGAGCCGGTGGCGAGGCGATACTTCCAGCAATTGGTCTCCGCGATGTGTTTCTGCCACCGAAACGGCGTCGCACACCGCGACGTCAAGCCTCAGAATCTCCTGCTAGACAGCGACGGAAATCTCAAGGTCTCCGACTTCGGGCTCTCCGCCTTGCCCGAGCAGCTCAAAAACGGCTTGCTCCACACGGCTTGCGGCACGCCGGCTTACACGGCGCCGGAGATCCTCTGCCGGCGCAGCTACGACGGCTCCAAAGCCGACGCGTGGTCCTGCGGCCTCATCCTCTACGTCTTACTCGCCGGATACCTCCCCTTCTCCGACGCCAACATCCCGGACATGTGCAAAAAGATCAGCCGCCGGGATTACCAGTTCCCGGAGTGGATCTCCAAGCCGGCGCGACTCGTGATCCACCGGTTACTCGACCCGAACCCAAAGACCCGGATGAGCCTCGAATCCCTCTCTCAAAACTCGTGGTTCAAGAAATCGCTGAAGATCCGACCCGAGGAGAGCGTATTCGAGTCGGGCCCGAACGCGAAGTGGTACAAGAAAGCGGAGACAATGGGTTCGGGTGTGAACGCGTTTGACATAATATCGATGTCGTCGGGTTTGGATTTGAGCGGGTTGTTCGAAACGACGTCGGATGGGAAGGGGATGAGGGAGAAGAGGTTCACATCTCAGGCGTCGTTGGAAGTAGTGGAAGAGAGAGTGAAGGAGATAggtggggttttggggttcagaGTTGAGATGGCAAAGAATGGAGCAATTGGGTTAGGGAAAGGGAAGGTCATTTTGGTCATTGAAGTCTTGGAGATTGTTCCTCAATTGCTATGGGTGGCAGTGAAAGTGATGGATGGTGGTTTGGAGTTTGAACAATTTCATTGGCAAGATTGGAAACTTGGCCTTCAAGATATTGTTGTGTCATGGCACAACAATAATGAATCACTCTGA 1275 0.5318 MAVINRSNHQTIKWWKDGLIGRGSFAKVYQARSLIDGSTVAVKIIDKSKTDAAMEPRIIREVDAMRRLQDHPNILRIQEVMATKTKIYLIVEFAAGGELFSRISRKGKMTEPVARRYFQQLVSAMCFCHRNGVAHRDVKPQNLLLDSDGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTAPEILCRRSYDGSKADAWSCGLILYVLLAGYLPFSDANIPDMCKKISRRDYQFPEWISKPARLVIHRLLDPNPKTRMSLESLSQNSWFKKSLKIRPEESVFESGPNAKWYKKAETMGSGVNAFDIISMSSGLDLSGLFETTSDGKGMREKRFTSQASLEVVEERVKEIGGVLGFRVEMAKNGAIGLGKGKVILVIEVLEIVPQLLWVAVKVMDGGLEFEQFHWQDWKLGLQDIVVSWHNNNESL 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1646 424 PANTHER SERINE/THREONINE KINASE 11 420 - -
Sto12g1646 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Sto12g1646 424 Pfam Protein kinase domain 17 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1646 424 Gene3D Kinase associated domain 1, KA1 302 416 - -
Sto12g1646 424 Pfam NAF domain 300 357 IPR004041 GO:0007165
Sto12g1646 424 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Sto12g1646 424 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Sto12g1646 424 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 11 420 - -
Sto12g1646 424 ProSiteProfiles Protein kinase domain profile. 14 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1646 424 ProSiteProfiles NAF domain profile. 295 319 IPR018451 GO:0007165
Sto12g1646 424 Gene3D Transferase(Phosphotransferase) domain 1 10 301 - -
Sto12g1646 424 CDD CIPK_C 301 411 - -
Sto12g1646 424 SMART serkin_6 14 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1646 Sto-Chr12 12001778 12003373 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1646 20 419 CBL-interacting serine-threonine protein kinases AT4G14580 59.459 7.68e-162 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto12g1646 Pkinase 4.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1646 K12761 - gmx:100784173 583.563