Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1617 ATGGAGGCTCCGGATTACTGCTTCGACTGCCTCCAACTTCGAATCAAATCCGATTTCTCAGACCAACTCGTTTTCAATTACGGCATCTCCACCTCCGCTTTCCCGTTTGGATCCTCCGCTATCGTTCAGaTTTCTAGTACTACAGGTGGTGAGGCTACAGCTGGTCAATTTATTTTGGTATATATGCCCAGTCGTGAGGAGGATTGTTTCACCAAATACATTAATGAATATATTCTGGATAATGGTGACTGCAGTAAAAGTAATGATTCTGATATTGATGTATTTGGAGCAAaaaatattACTTGTAGTCATTCTGGAAGATTTTCTTGCTTGAGAACAATCACTGCTCTGGCCCCAATTGCACACATAGGAAACTCTTCGTATTCTACTTTTGAAGAGGTTGCAACTGACTTCTTGTCTGGCTCActagaagatcacattttagATTCACTTGGACTCTTGATTGAAGGGAAAGCATCTGGACGAGACAGCATAAATTTCCTAAATTTAATTGGTATGCCGTCATTTGAAGAAGATATTGTTCCAGGTTCCTTGAGGCATCCGAACATAGCTCCTGTTATTGCAATGTCAAAAACATCCAAACATGTTAACATGGTTCTTCCAAAAACTCCCTATACCCTGGAAACTGTTCTTCACTATAACCCTAATGCCTTAAAGTCTGAATGGCATAGAAGATTCCTTATATATCAGCTACTATCTGCATTATTATACCTACATGGCTTGGGGGTATCCCATGGGAGTATATGCCCATCCAATATTATGTTGACTAACTCATTATGGTCTTGGCTGCGGTTGTGGAATGAACCTGCATTGGAATATAATTTAAAGCCACAAAGGAGTGAAGCAAATATTTCTGCCCTAGCAAATATTGGCTGTTGCAATGGTGGTTGTCAATCTAATAGCATTTATGCAGATCTAAAACTTTCTCCATCAATAGATTGGCATTCTAGCTTTAGTCGATGGTGGAGAGGAGAATTAAGTAATTTTGAATATTTACTCATCTTAAATAAATTGGCAGGGAGAAGGTGGGGGGATCACACATTTCATCCAGTAATGCCTTGGGTAATAGACTTCAGTTCAAAACCTGATGAAAATTCTGATGCAGGATGGCGAGACTTAAGCAAGAGCAAATGGCGCTTGGCTAAAGGTGATGAACAGTTGGATTTTACGTATTCAACTTCTGAAATCCCTCatcatgtatcagatgaatgtCTGTCTGAATTGGCTGTCTGTAGTTATAAAGCACGAAGGCTACCCTTGAGTGTTCTTCGTATGGCTGTTCGTTCAGTATATGAACCTAATGAATATCCCTCTACGATGCAGAGACTCTACCAGTGGACCCCTGATGAATGCATTCCAGAGTTTTATTGTGATCCCCAAGTTTTTAAGTCAATACATGCTGGTATGTCTGATTTGGCTGTACCTTCTTGGGCAGAGAGTCCTGAGGAGTTCATTAAATTGCATCGCGATGCATTAGAAAGTGACAGAGTCTCATTTCAACTACATCATTGGATAGATATCACCTTTGGGTATAAAATGTCAGGTGAGGCAGCTATTGCTGCGAAGAATGTTATGCTTCCTGTATCAGAACCTATGATGCCAAGATCAACAGGACGCCGGCAGCTCTTTACACGGCCACACCCCATTCGTCATGGCACTACCAGAATAACATGTCATTCTGCCGATAGAAATGCCAAGGTTTGGAGCCAAGTGAATGGGATGCAAAATGAAATCCTTCCTGTAGTTAGTTATTTGCAAGAATTAGAAGAAGCGTCAGCATTTTCTGAACATGCTAGATATCTGAGTGCTTCATACCATTATCCATTAAATACACTAGAGAGGGATATCTCATCTTTGAAAGATCCACTAAAGGAGACATGTAGCCACAGTATGTCTGAACAATCTTTGATAGGCAAAACTGATCACATGGTGCCATTGAAAGTGGACCTGATTTATTTTCTGCAGCATATAAAGGAGGAAAATGAATGTTCATCAGGATATTCAGACTTGTTGCTTTGGAAGCAGAAATTATCTTGTTCAAAACTTGTCTCCAAAGATGTTGCAAGGGACATATTTTCTGTTGGTTGTCTCTTAGCAGAACTTCATCTGTGTAGGCCACTCTTTGATTCGACCTCCTTGGCCATATACTTGGAGGATGGAACCTTACCAGGATCTTTGCAGGAACTACCACCCCATGTTAGATTACTTGTCGAAGCATGCATTCAGAAAGATTGGATAAGGAGGCCAACAGCCAAAACACTTCTGGAATCACCTTATTTTCCAAAGACAGTAAAATCGTCCTACTTGTTTCTTGCTCCACTTCAGCTTTTGGCTAAAGACGAAACCCACCTTCGCTATGCTGCAAATTTTAGCAAGCTGGGAGCCCTAAGGGCAATGGGCACATTTGCAGCTGAAATGTGTGCTCCATATTGCTTGCCACTTGTATTAAATTCTCTGAATGACACTGAAGCTGAATGGGCCTACATACTAGTGAAGGAATTTATAAAAAGCTTAACAGCACAAGCTGTTAAAACGCTAATCTTACCAACCATCCAGAAGATTCTTCAGATGACAGGAGACTCTCATTTGAAGGTTTCTCTTTTACAAGATACATTTGTACATGAAATATGGGATCGAGTTGGTAAACAAGCATATCTGGAAACTATTCATCCGTTGGTCTTGTCAAACCTCTACGTTTCTCCTCATAAAAATTCAGCTGTCTCTGCTTCTGTGCTGCTAATCGGCTCTAGTGAGGAGCTTGGCATACCCATTACCATCCATCAGACAATCTTGCCTCTGATTTACTGCTTCGGGAAAGGACTATGTGCTGATGGAATTGATGTGCTGGTCAGAATTGGTGGTGTTTTTGGGGAATCCTTTATTGTCAAACAGATGCTACCAATTCTAAAAAACGTAGTTCGTTACTTCATTGATGTATCACACATGAATAAGCCTGATCCTGTACAGAGCTGGAGTGCTTTAGCACTTATTGATTGTATGATGACATTAGATGGCCTTTTATCTTTCCTCACAGAAGAGGCAATTGTAAAGGAACTGCTTGAAGATCAAAGTTGCCTACACATTGGGGTTCTTATGCAGAAACATATGGAAATTGCAGTGCTTCAGGTTGCTGCTACTACTTTATTTGCAATTTGTGAGCGGATTGGGCAAAATTTGACAGCGGTGCATATTCTACCAAAACTCAAAGAACTATTTGACGAGCTTGCTTTCTCCCAGGAAGTTGCTAAAGGTTCTGCTACAGTTGGCAGAAGCTTGAAGATTGCCAAGTTAAAAATTGGTGGGGAGTTACAAATTGAAAGTCGTACGGATCTAGTGTTGCTTCTCTATCCTTCGTTTGCATCTTTTCTTGGTATAGAAAAACTTCGTCAATGTTGTGCTACATGGTTGCTTCTTGAACAATTTCTTCTACGTCGTCATAATTGGAAGTGGGAACATCCAGGTGAATCATCAAAAAGTGGTTCAGAAAATATCATTGCCAGAAGACCTACTACTGCCAGGGGCCTTAAAAATGAATACAATCCAGCAAAGCTGTTGCTCAATGGGGTCGGGTGGTCGATTCCACAATCCCAAGGAAGTAGaagttccaaaaacttgattccTCAGAGACGATCAAATGAAGTTCGTCAAAATCCAGTGGTAATGCATGAAGGAATTTCACACCAAAGTAATCATGCACCCTGGTTTTGGTTCCCTAGTCCAGCCACTATCTGGGAAGGTCCTGAATTTCTTGGGCGTGTGGGTCTTCAGAAAGATGATCTTCCATGGAAGATTAGAGCATCTGTTATATACTCTATACGTGCACATCAAGGAGCAGTGAGGTCTTTAGCTGTATGTCAAGATGAGTGTACTGTTTTCACAGCAGGAATTGGCCATGGGTATAAAGGAACTGTTCAGAAGTGGGAACTAAGCCGAACTAACTGTTTATCTGGCTATTATGGTCATGAAGAGGTTTTCTTCTTCTATCTTTTGCTTTCATCCAGTGGAAGAGTGGCATCCTGTGATGGAACCATTCATGTTTGGAACAGTCAAACGGGGAAGCAAATAACAGTATTTGCTGAGTCTCAAGTAGAATCTGGCAATCTTACAAGCCATATATCTTCTCCATCAAAGATCAACAGTGACCAGGCTAATGTGCTTAATTTGAATTCACTATCAAATGGAATATTGTCTAGCACTTTCGATTCAAGCCTCTATACTTGTATGCATCTATTAGAATCTGCTGAAATTCTTGTAGTTGGCACAGGAAATGGCTCTCTGAGGTTCATTGATGTCGCTCAAGGACAAAAGCTTCATATCTGGAGAGGGGAATCTAAAGAATCTAGTTTTCCTTCACTTGTTTCTGCCATTTGTTCCTCTGGGGCAGACAAGGTGCAAGCAGGTGGATTTTCTACTTTGCCATCTTTAATTGCAGCTGGATTAAGTTCTGGTCATTGTAAATTATTTGATGCAAAGAGTGGAAATGTTGTCGCCTCTTGGCGAGCTCATGATGGATATGTGACCAAGTTGGCAGCGCCTGAAGACCATCTGCTCATTTCCAGCTCTCTGGACAAAACTTTACGAGTCTGGGACTTAAGGATGAATTTGCCATCACAGCCCATTATTTTCAGAGGTCATTCAGATGGGATATCAAGTTTCTCCATGTGGGGCCAAGATGTTATTTCAATTTCCAGAAATAGGATTGGGCTTCTCTCCTTATCTAAATCTGCTGATGAAACTGATGGACAGCATCACATTATTCCTCAGAAACTCTACACATCAGATAATGGATCAAGAAGCTTATCAGCATTGTCCAGTATCAGTATCCTCCCATACTCACGTTTGTTTCTTGTTGGAACAGAAGATGGTTATCTTAGGATATGTTGCTAG 4908 0.4046 MEAPDYCFDCLQLRIKSDFSDQLVFNYGISTSAFPFGSSAIVQISSTTGGEATAGQFILVYMPSREEDCFTKYINEYILDNGDCSKSNDSDIDVFGAKNITCSHSGRFSCLRTITALAPIAHIGNSSYSTFEEVATDFLSGSLEDHILDSLGLLIEGKASGRDSINFLNLIGMPSFEEDIVPGSLRHPNIAPVIAMSKTSKHVNMVLPKTPYTLETVLHYNPNALKSEWHRRFLIYQLLSALLYLHGLGVSHGSICPSNIMLTNSLWSWLRLWNEPALEYNLKPQRSEANISALANIGCCNGGCQSNSIYADLKLSPSIDWHSSFSRWWRGELSNFEYLLILNKLAGRRWGDHTFHPVMPWVIDFSSKPDENSDAGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQVFKSIHAGMSDLAVPSWAESPEEFIKLHRDALESDRVSFQLHHWIDITFGYKMSGEAAIAAKNVMLPVSEPMMPRSTGRRQLFTRPHPIRHGTTRITCHSADRNAKVWSQVNGMQNEILPVVSYLQELEEASAFSEHARYLSASYHYPLNTLERDISSLKDPLKETCSHSMSEQSLIGKTDHMVPLKVDLIYFLQHIKEENECSSGYSDLLLWKQKLSCSKLVSKDVARDIFSVGCLLAELHLCRPLFDSTSLAIYLEDGTLPGSLQELPPHVRLLVEACIQKDWIRRPTAKTLLESPYFPKTVKSSYLFLAPLQLLAKDETHLRYAANFSKLGALRAMGTFAAEMCAPYCLPLVLNSLNDTEAEWAYILVKEFIKSLTAQAVKTLILPTIQKILQMTGDSHLKVSLLQDTFVHEIWDRVGKQAYLETIHPLVLSNLYVSPHKNSAVSASVLLIGSSEELGIPITIHQTILPLIYCFGKGLCADGIDVLVRIGGVFGESFIVKQMLPILKNVVRYFIDVSHMNKPDPVQSWSALALIDCMMTLDGLLSFLTEEAIVKELLEDQSCLHIGVLMQKHMEIAVLQVAATTLFAICERIGQNLTAVHILPKLKELFDELAFSQEVAKGSATVGRSLKIAKLKIGGELQIESRTDLVLLLYPSFASFLGIEKLRQCCATWLLLEQFLLRRHNWKWEHPGESSKSGSENIIARRPTTARGLKNEYNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRSNEVRQNPVVMHEGISHQSNHAPWFWFPSPATIWEGPEFLGRVGLQKDDLPWKIRASVIYSIRAHQGAVRSLAVCQDECTVFTAGIGHGYKGTVQKWELSRTNCLSGYYGHEEVFFFYLLLSSSGRVASCDGTIHVWNSQTGKQITVFAESQVESGNLTSHISSPSKINSDQANVLNLNSLSNGILSSTFDSSLYTCMHLLESAEILVVGTGNGSLRFIDVAQGQKLHIWRGESKESSFPSLVSAICSSGADKVQAGGFSTLPSLIAAGLSSGHCKLFDAKSGNVVASWRAHDGYVTKLAAPEDHLLISSSLDKTLRVWDLRMNLPSQPIIFRGHSDGISSFSMWGQDVISISRNRIGLLSLSKSADETDGQHHIIPQKLYTSDNGSRSLSALSSISILPYSRLFLVGTEDGYLRICC 1635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1617 1635 ProSiteProfiles Protein kinase domain profile. 117 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1617 1635 Gene3D Transferase(Phosphotransferase) domain 1 179 294 - -
Sto12g1617 1635 SMART WD40_4 1318 1355 IPR001680 GO:0005515
Sto12g1617 1635 SMART WD40_4 1400 1437 IPR001680 GO:0005515
Sto12g1617 1635 SMART WD40_4 1600 1635 IPR001680 GO:0005515
Sto12g1617 1635 SMART WD40_4 1440 1496 IPR001680 GO:0005515
Sto12g1617 1635 SMART WD40_4 1499 1537 IPR001680 GO:0005515
Sto12g1617 1635 SMART WD40_4 1272 1315 IPR001680 GO:0005515
Sto12g1617 1635 Pfam WD domain, G-beta repeat 1501 1537 IPR001680 GO:0005515
Sto12g1617 1635 CDD Beach 327 557 IPR000409 -
Sto12g1617 1635 Gene3D - 1269 1471 IPR015943 GO:0005515
Sto12g1617 1635 Gene3D BEACH domain 318 557 IPR036372 -
Sto12g1617 1635 ProSiteProfiles Trp-Asp (WD) repeats profile. 1506 1539 IPR001680 GO:0005515
Sto12g1617 1635 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1506 1539 - -
Sto12g1617 1635 ProSitePatterns Trp-Asp (WD) repeats signature. 1524 1538 IPR019775 -
Sto12g1617 1635 Gene3D - 1472 1635 IPR015943 GO:0005515
Sto12g1617 1635 SUPERFAMILY BEACH domain 316 557 IPR036372 -
Sto12g1617 1635 Pfam Beige/BEACH domain 327 536 IPR000409 -
Sto12g1617 1635 PANTHER GH12955P 1 1635 - -
Sto12g1617 1635 SUPERFAMILY Protein kinase-like (PK-like) 693 798 IPR011009 -
Sto12g1617 1635 SMART Beach_2 325 557 IPR000409 -
Sto12g1617 1635 ProSiteProfiles BEACH domain profile. 313 582 IPR000409 -
Sto12g1617 1635 Pfam Protein kinase domain 183 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1617 1635 Gene3D Transferase(Phosphotransferase) domain 1 682 775 - -
Sto12g1617 1635 CDD PKc 184 265 - -
Sto12g1617 1635 SUPERFAMILY WD40 repeat-like 1263 1633 IPR036322 GO:0005515
Sto12g1617 1635 SUPERFAMILY Protein kinase-like (PK-like) 184 267 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1617 Sto-Chr12 11548812 11557682 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Sto12g1617 Beach 4.1e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1617 K17601 - gmx:100809116 2612.79