Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1608 ATGAACGCCGGCACCATCACGTCGCGCTCCATTCTCGACAAGCCCCTCAATCAGCTCACCGACGATGACATTTCACAGCTCACCCGCGAAGATTGCCGAATGCGTCGCCCTTCGTGGAACAAATCGCAGGCGATCCAGCAAGTTATATCCCTCAAAGCTTTGCTTGACCCCTCGGACGACGATTCCGGCGCCGGACCCCTCAGGAGATTGGCTTTTGTTTCGGCTCAAGAAGATACTGCGCctGGGAATCTAGATGGGACTGGTAGTGGTGGCAGTGGAAGCGGCTGcggcggaggaggaggaggaagtggTGCTAATGTGGCTGGAGTTGACGCGACGGTGTCGGGCGGGCCAGCCGAAGAACCGGGTTTTCATGCTGCAGAGGAGCTTCCCAAATCTGGGTCATCTGGGGAAAAACCTACAAATACTGAAACAAATGAGAAGGTCGTCAGTCCTAGAGAGTGTGCAACTAGCGGATCACTTGGGCAAATGACAATTTTCTACTGTGGTAAGGTGAATGTATATGATGGAGTGCCGCCTGATAAGGCACGAGCTATCATGCAGCTTGCAGCGAATCCAATCCATCTGCCTCAAGACGATCAAAGCAATAGAAGTACAGCAGTCTGGCCTTCTTGCCACTTGCATATGGATAAAGACGTGCTTGTCCCAGTTGATAGCATAATCCCTCAGGTTACTCAAGCAGATAAGGTGGTGGAATATCCTTTGCATTACAGGGAGAAAGGCAGCGCAGCTCGAGATGCTGATGTAGAGGGTCAGGCCAGCAGAAAAGTGTCACTGCAACGATATCTGGAAAAGCGAAAAGACAGGTGTTACCAGAAGGGAAGATTAAAGAGCAAGAAATTTCCCGGAGTAACTTCATCTAACTTGGAAATGTATTTTAACCATCAAGTGAAGCCTCATGCCTCAAATGGGAATTCAAGCCGCAGTAGCACAAGCTCTCCCCCCCAGCCTATACTGCCGCAAGCTTTTGGTGGCTCAGCTGATAATCAGCCGAAGATTGCCCTTCCTGTTGATCTTAATCACAAAGGTAGCCACTAA 1059 0.4901 MNAGTITSRSILDKPLNQLTDDDISQLTREDCRMRRPSWNKSQAIQQVISLKALLDPSDDDSGAGPLRRLAFVSAQEDTAPGNLDGTGSGGSGSGCGGGGGGSGANVAGVDATVSGGPAEEPGFHAAEELPKSGSSGEKPTNTETNEKVVSPRECATSGSLGQMTIFYCGKVNVYDGVPPDKARAIMQLAANPIHLPQDDQSNRSTAVWPSCHLHMDKDVLVPVDSIIPQVTQADKVVEYPLHYREKGSAARDADVEGQASRKVSLQRYLEKRKDRCYQKGRLKSKKFPGVTSSNLEMYFNHQVKPHASNGNSSRSSTSSPPQPILPQAFGGSADNQPKIALPVDLNHKGSH 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1608 352 MobiDBLite consensus disorder prediction 135 155 - -
Sto12g1608 352 MobiDBLite consensus disorder prediction 305 352 - -
Sto12g1608 352 MobiDBLite consensus disorder prediction 305 326 - -
Sto12g1608 352 SMART tify_2 157 192 IPR010399 -
Sto12g1608 352 Pfam Jas motif 259 280 IPR018467 -
Sto12g1608 352 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 4 80 IPR040390 -
Sto12g1608 352 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 112 330 IPR040390 -
Sto12g1608 352 MobiDBLite consensus disorder prediction 78 155 - -
Sto12g1608 352 Pfam tify domain 163 191 IPR010399 -
Sto12g1608 352 ProSiteProfiles Tify domain profile. 157 192 IPR010399 -
Sto12g1608 352 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 112 330 - -
Sto12g1608 352 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 4 80 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1608 1 309 Tify Gene Family AT4G14720 45.597 1.12e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sto12g1608 tify 8.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1608 - - gmx:100808970 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1608 12 11442427 11447148 Sto12g1608 12 11442427 11447148 ECH