Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1600 ATGGGGAAGACAAGCAAATGGCTCAGAAGCATCTTGACTGGCAAGAAGTCAGAGAAGGACAAAATTTCGCCatccaagcccaagcccaagcccaggcTCAGGCCCACAGATTCCAATTCCGACACCACCATTACTGCTAATAAAGATTCAATCATCACTGTCGTCACCACCGCTGCGACTCCGACCAAAGAGAAAAGACGATGGAGTTTCCGAAGATCATCCGCGGCGGCGCCGGCGCCGGCGCCGCCTTCTTCGGCGGAATCGAACGCGGCGGCTACTAATTCGGCGGTAGATGGTGAGAATtttgatgaggaggaggagaaaaagAAGCACGCCATGGCTGTGGCTGCGGCTACAGCCGCGGCTGCTGATGCGGCTGTGGCCGCGGCTCAGGCGGCGGCTGCTGTGATACGCTTGACGGGCGCTGCCGGCTCGAACAATGGCTTGGCTAGAAGCTTTGAGGAGGCTGCAGCCGTTAAAATTCAGTCCGTTTTTCGGTCTTATTTGGCAAGGAAGGCATTGTGTGCACTTAGGGGTCTAGTGAAGTTGCAAGCATTGGTGAGAGGCCACTTAGTGAGAAAACAGGCTAAAGCTACATTGAGGTGTATGCAAGCGTTGGTCACAGCACAAGCAAGAGCGAGAGCTCAGAGGATCCGAATGGTATCAGAAGATAACACTAACCAAAGGCAATCAACTTCCAGAAAAGCCacggaagaggaggaggaggaggacttATTCAGTCATATTTACGATGAAATGGACAATATGAATGTGGAAGAAAACATCAAAATAGTAGAAATGGACGTTTGTGAAACCAAATGTGAAaccagaagaagaaaaaacaacacaaatcatcatcatcatcatcatcataatagAGTCTCCACATATAATAATGAAGAAAGCTTCAATAAGGTATCCCCAGCCCCCTCAGTTCTCACAGATATGAGCCCAAAAGCCCACAGTGGTCACTTTTTGGAGGACTCCACATCCTACACCACGGCTCAAAGCAGCCCACAATACTACTACTCAGCCATATCATCAAGGCCCAACGAGGCCAAAAGTAGTGTCCCATTCACTTTTCCTAAGCCACCCTACGCGGAGTCCGTAATGTCCTATGACTACCCTCTGTTCCCGAATTACATGGCCAATACGGAGTCGTCGAGGGCGAAGGTGAGGTCGCAGAGCGCGCCAAAGCAGCGGCCGGCGGATTACGCGCCGTCGTCGTTCGAGAGGCAGTCGAGCCGGCGGCGGGCCTCAGTGGAAGGGAGGAACGTGCCGAGGCCCGTGAAGATGATGCAGAGGTCGGCGTCACATGTGGGCCCCGCGGCACAGAATTACCAGTACCCTAATTGGTCGGGTGTGGGTGTGAAGCTTGATAAGTCGTCAGCTTCGCTGAAGGATAGTGAGTGTGGGTCCACAAGTACTGTGCTTACCAATGCTAACTACTGCAGGTCTCTTGTGGGTTATGATGTAAGTGCTTCTAAATTCTCATAA 1497 0.4763 MGKTSKWLRSILTGKKSEKDKISPSKPKPKPRLRPTDSNSDTTITANKDSIITVVTTAATPTKEKRRWSFRRSSAAAPAPAPPSSAESNAAATNSAVDGENFDEEEEKKKHAMAVAAATAAAADAAVAAAQAAAAVIRLTGAAGSNNGLARSFEEAAAVKIQSVFRSYLARKALCALRGLVKLQALVRGHLVRKQAKATLRCMQALVTAQARARAQRIRMVSEDNTNQRQSTSRKATEEEEEEDLFSHIYDEMDNMNVEENIKIVEMDVCETKCETRRRKNNTNHHHHHHHNRVSTYNNEESFNKVSPAPSVLTDMSPKAHSGHFLEDSTSYTTAQSSPQYYYSAISSRPNEAKSSVPFTFPKPPYAESVMSYDYPLFPNYMANTESSRAKVRSQSAPKQRPADYAPSSFERQSSRRRASVEGRNVPRPVKMMQRSASHVGPAAQNYQYPNWSGVGVKLDKSSASLKDSECGSTSTVLTNANYCRSLVGYDVSASKFS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1600 498 Gene3D - 154 206 - -
Sto12g1600 498 ProSiteProfiles IQ motif profile. 154 182 IPR000048 GO:0005515
Sto12g1600 498 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 474 - -
Sto12g1600 498 MobiDBLite consensus disorder prediction 280 302 - -
Sto12g1600 498 Pfam IQ calmodulin-binding motif 156 174 IPR000048 GO:0005515
Sto12g1600 498 Pfam IQ calmodulin-binding motif 181 197 IPR000048 GO:0005515
Sto12g1600 498 MobiDBLite consensus disorder prediction 389 427 - -
Sto12g1600 498 SMART iq_5 176 197 IPR000048 GO:0005515
Sto12g1600 498 SMART iq_5 153 175 IPR000048 GO:0005515
Sto12g1600 498 ProSiteProfiles IQ motif profile. 178 205 IPR000048 GO:0005515
Sto12g1600 498 MobiDBLite consensus disorder prediction 1 110 - -
Sto12g1600 498 MobiDBLite consensus disorder prediction 221 243 - -
Sto12g1600 498 MobiDBLite consensus disorder prediction 36 63 - -
Sto12g1600 498 MobiDBLite consensus disorder prediction 12 35 - -
Sto12g1600 498 Pfam Protein of unknown function (DUF4005) 342 423 IPR025064 -
Sto12g1600 498 PANTHER IQ-DOMAIN 5-RELATED 1 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1600 Sto-Chr12 11291027 11294008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1600 1 497 IQD Protein Family AT4G14750 41.765 3.27e-96 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1600 - - gmx:100817667 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1600 12 11291027 11294008 Sto12g1600 12 11291027 11294008 ECH