Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1593 ATGGAAGGAACAATTTCTTCCAAAGAAGACACCAATACTTCAATTGATCTCACACAAATCACCATCCGACCCATTGAAGATTCTGATGCAGATGATCTCATGGTGTGGTCTAGTGATGAAGAAGTGACCAAATTTTGCACTTGGGAGCCATACACAAGCAAACAAAATGCCATAGATTTTATCAATAAGGTCCCTACCACTTTCACATGGTACAAGGCCATTTGCCTTCAGAATAGGGCCATTGGGTCAATTTCTTTGTGCCTGTGTCCTCCAGAAGATAGGTTCAGAGCCAAGACTGGTGAGATTGGATATATTTTGGGTAGAAGGTTCTGGAACAAAGGGATTGTTACTGAGGTTTTGAAGAAAGTGAGTAAGGCCGTGTTTGGGGAGTATCCTCATTTGGAGAGGCTTGAGGCTCTCACTGACTTGGAAAATGTGGGGTCTCAGAGGGTGTTGGAGAAGGCTGGTTTTGTGAAGGAGGGGGTTTTGAGGAATTATATGTTTATTAAGGGGAGAAGTAGAAATGTGGTTGTTTTTAGTCTTCTTCCTAGTGATTTGGAAACTCAAGTTGCTTCCTTGAGTTTGTGA 588 0.4235 MEGTISSKEDTNTSIDLTQITIRPIEDSDADDLMVWSSDEEVTKFCTWEPYTSKQNAIDFINKVPTTFTWYKAICLQNRAIGSISLCLCPPEDRFRAKTGEIGYILGRRFWNKGIVTEVLKKVSKAVFGEYPHLERLEALTDLENVGSQRVLEKAGFVKEGVLRNYMFIKGRSRNVVVFSLLPSDLETQVASLSL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1593 195 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 20 183 IPR000182 GO:0016407
Sto12g1593 195 Gene3D - 11 194 - -
Sto12g1593 195 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 11 186 - -
Sto12g1593 195 Pfam Acetyltransferase (GNAT) domain 20 157 IPR000182 GO:0016407
Sto12g1593 195 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 11 186 - -
Sto12g1593 195 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 20 182 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1593 Sto-Chr12 11233991 11234578 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Sto12g1593 Acetyltransf_3 5e-27 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1593 - - mtr:MTR_5g006520 221.861