Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1592 ATGGATACACCAGAGAGGAACCAGATCGGGACTTCCCTCTCCAAATTTGAGGTTTACTTTGAatttcctcttctttctcgTTGTTTCAGCCTTCAATTTGGTGGTGTTTTGTTGATAATCTCGAGCCGATTCGTGGCGAAGGGGTTGTTGACTTGGTTTCTGCGTTGCTCTGTGTTACTGCATGTGTTTGATTTCACAGTggggatTTCACCGtgttgggtttggtgtttgggagtTTTTGGAACaaatcttgttgattttgatgtgGGTAATGCTATAGATCTCATGCTGAGTTCAATTTGGAAGTCCCCTTGTGCTATAGGTTTTCAGCATATTGTGGAAAATTATCGAGTTCTTGTCTTCCCTTCTACTTTAGATTCTTCTGAGAACATGTACTTTGGAGTTTTGCGGAGTTTCTCTCCCAAACCTGGAAGTCAAAGATGCTGGTCTCAAATTGAAGTTTCTATAAGCTTCTGCTATGGAGATTCACCAGTCTTCAACTATATTAATAATCTTTCTCCTATAAAGCCAGTTAAGTCTATTCACAGTATTCAGACTTTCAACTCACTTAACTTTTCATCTCCTCCATCTGTTTTTACATCACCACATGTCATCTGTCCCAAGGAATCTAGATTTCTCAGGAGGCATAACCTTTTGGACACTTCAAAGCCTAAGGTTTTGTCTGAAGACGGGAAGAAATTATCTTCAAATGAAGAAGCTCTTGCAGATTCGACTCATGCATATCGTAATTCAAGTGAGCTACGGGGAAACACTGATCAAAGGATTCCCATGGGAGATTCTTCAGTTGAGCCATCTAATGAAAACCCAAACTTTCCAATTGAACTACCACAAACCTTAAAATATGATTGTGGTAGCCCAGGTTGTGATCCTCCACCTTCTGGTGATGAGACAAATTCTCTTCTGAATTTGTCTAGTAAAGCAGCATCAGATGAAGCCTCTAAAAGAAATTCACCCGAGAGTGTAGTGCTTCTTCAGGGAATATGCCAAATTGAGCCTAGAAATGAAGGCCCAGAATGTGATTGGGACACTTTACTTTCAGATGCTGCTGATCTGTTAATTTTTAACACTCCAAACGAAAGAGACACTTTAAAGGGTCTGATGGAGAAATCATTTGACCCTACAATGCACCTTAGCAATTTTATGTCTCAGATGCCACAAACTACCCTCAATAATGGTGAAAAAATGTCCATTATTGATCCAGTTGCTTCTGGATCAGAGCATGAAATTGAAGATCATCATTCTAAACCGGGAGAAATCAATGGCAATGATGAGGCACAGGACAATCTTACTAATGCTGCTGTGACTGCGAACAATCCAAATGGTACTGTGGATAATGAGCTTGTTTCTATTACACACCATGGCATGCGGAGGCGTTGTCTAGACTTTGAGATGGTTGGAGCAAGGAGGAGGAAGTCAGATGATGGTTCAAATAATAGTTCTACTACATTACAATCTGATAAGAGGGATATTGCTAGTGATAAGCAGCTGCTTCCTGCGAAACGCAATGGTGATTCACAGAGGTGCATTTTACCTGGAATTGGTTTACACTTGAATGCTCTTGCGACTTTAAAAGATTATAAAagcataaaaaatgaaaacatgTCTTCTGGAAGACAACTCAGTCTACCCGGGCCGGCTTCAGCCTTGCAACTCTCTGCAAGCCAGGAGCATCATCAATCATTGGTTTGTGCATCGGCTGAAAGAGATATTGATCCCCCAGACAATGCGGTTCAACTAGCTGAAGATTGTTCCCAGGCATTAGCTTGTGTGTTGGAGCCAGCTGGAGAAAGTGAGTCCTGTAAACGTTGCAATTGTAAGAAATCGAAGTGTTTGAAGCTTTATTGTGAGTGCTTTGCTGCTGGTGTCTACTGCATAGAACCTTGCTCCTGTCAGGATTGCTACAACAAACCTATACATGAGGACACTGTTCTGGCAACTCGTAAGCAGATTGAGTCTCGTAATCCCCTTGCATTTGCTCCGAAAGTCATCAGAAGCTCTGATTCTGTACCTGAAATTGGGGATGACCCCAACAAAACTCCTGCTTCAGCACGTCACAAAAGAGGATGCAACTGCAAGAAATCAAACTGCCTAAAGAAATACTGTGAATGCTATCAGGGTGGTGTTGGCTGCTCCATTGGCTGTAGATGTGAAGGGTGCAAGAATGCATATGGTAGAAAGGATGGTTCTGCTCCTATAGGAATAGAAGCTGAaccagaagaagaaaaagaatcatCTGAAAAGGCTGTGGTTGAAAAAACTGTACAAAAACCTGAAATTCAGAATACTGAAGACCATCCAGATTCTTCTCTTGCGACAACCCCATTACGGCTTTGCAGACCACTGCTTCCGTTGTCCTTCTCATCAAAGGGAAAACCACCAAGATCCTCTTTCATTACTACCATTCCAGCTTCTGGATTGTATGCCGGCCAAAAACTCGGGAAACCCACTATCCTTCGATCTCAACCCAAGTTTGAAAAGCAATTCAAAACCATTTCTGATGATGAAATGCCAGAGGTTCTCCGAGGCGATGGCTCTCCAAGCATCAAGACATCATCTCCCAACGGCAAAAGGATCTCGTCTCCGAACTGTGACTTCGGATCGTCGCCTAGTCGCAGAAGTGGCAGGAAGTTGATATTACAATCCATCCCTTCCTTTCCTTCTCTCAATCCTCACAACCTTTAG 2703 0.4084 MDTPERNQIGTSLSKFEVYFEFPLLSRCFSLQFGGVLLIISSRFVAKGLLTWFLRCSVLLHVFDFTVGISPCWVWCLGVFGTNLVDFDVGNAIDLMLSSIWKSPCAIGFQHIVENYRVLVFPSTLDSSENMYFGVLRSFSPKPGSQRCWSQIEVSISFCYGDSPVFNYINNLSPIKPVKSIHSIQTFNSLNFSSPPSVFTSPHVICPKESRFLRRHNLLDTSKPKVLSEDGKKLSSNEEALADSTHAYRNSSELRGNTDQRIPMGDSSVEPSNENPNFPIELPQTLKYDCGSPGCDPPPSGDETNSLLNLSSKAASDEASKRNSPESVVLLQGICQIEPRNEGPECDWDTLLSDAADLLIFNTPNERDTLKGLMEKSFDPTMHLSNFMSQMPQTTLNNGEKMSIIDPVASGSEHEIEDHHSKPGEINGNDEAQDNLTNAAVTANNPNGTVDNELVSITHHGMRRRCLDFEMVGARRRKSDDGSNNSSTTLQSDKRDIASDKQLLPAKRNGDSQRCILPGIGLHLNALATLKDYKSIKNENMSSGRQLSLPGPASALQLSASQEHHQSLVCASAERDIDPPDNAVQLAEDCSQALACVLEPAGESESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCYNKPIHEDTVLATRKQIESRNPLAFAPKVIRSSDSVPEIGDDPNKTPASARHKRGCNCKKSNCLKKYCECYQGGVGCSIGCRCEGCKNAYGRKDGSAPIGIEAEPEEEKESSEKAVVEKTVQKPEIQNTEDHPDSSLATTPLRLCRPLLPLSFSSKGKPPRSSFITTIPASGLYAGQKLGKPTILRSQPKFEKQFKTISDDEMPEVLRGDGSPSIKTSSPNGKRISSPNCDFGSSPSRRSGRKLILQSIPSFPSLNPHNL 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1592 900 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 694 729 IPR005172 -
Sto12g1592 900 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 608 643 IPR005172 -
Sto12g1592 900 MobiDBLite consensus disorder prediction 240 280 - -
Sto12g1592 900 MobiDBLite consensus disorder prediction 852 900 - -
Sto12g1592 900 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 151 898 IPR044522 GO:0003700
Sto12g1592 900 SMART CXC_2 605 646 IPR033467 -
Sto12g1592 900 SMART CXC_2 691 732 IPR033467 -
Sto12g1592 900 MobiDBLite consensus disorder prediction 475 499 - -
Sto12g1592 900 MobiDBLite consensus disorder prediction 228 307 - -
Sto12g1592 900 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 151 898 - -
Sto12g1592 900 MobiDBLite consensus disorder prediction 837 900 - -
Sto12g1592 900 MobiDBLite consensus disorder prediction 760 779 - -
Sto12g1592 900 ProSiteProfiles CRC domain profile. 606 731 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1592 Sto-Chr12 11220731 11225595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1592 162 899 CPP Transcription Factor Family AT4G14770 43.767 2.90e-156 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Sto12g1592 TCR 4.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1592 - - gmx:100815907 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1592 12 11220731 11225595 Sto12g1592 12 11220731 11225595 ECH