Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1589 ATGATGGATTTGGAAGTTGGAGAAGGAGGTGATAAGGGGCCAGAGATGGATGTGGAAGCAGGAGGAGCTGAGAATTCAAAGATGAAGGGTAATGGAAGCCTTAGCAGCAAAGATAGGATTTTCAGAGCTGATAAGATTGATCTCAAAAATTTAGACATCCAGCTTGAAAAGCACTTAAGCAGGGTTTGGTCGAGGGAGATCGAGTCCAAAAGGCCTAAAGAAGAGTGGGAGATTGATATGGCCAAATTGGATTTACGATACATTGTAGCTCATGGGGCCTATGGTACAGTTTACAGAGGCACCTATGATAGCCAAGATGTTGCAGTAAAAGTGTTGGACTGGGGTGAGGATGGCGTCGCCACTACTGCTGAAACTGCTGCTTTACGGGCATCATTTCGGCAGGAGGTTGCTGTATGGCAGAAACTTGACCATCCAAATGTCACAAAATTTATTGGAGCTTCAATGGGATTATCAGATCTTAAGATTCCCAGAACAAACTCTTctgttgaggatcaaaattccCTTCCCTCTAGGGCATGTTGTGTTGTTGTTGAGTATATCCCTTGTGGGACGCTAAAACAACTCTTGTACAAAAATAGGTGTAAGAAACTTGCTTACAAAGTTGTGATTCAGCTGGCTTTAGATCTCTCTAGGGGTCTTAGCTATCTGCATTCAAAGAGGATTGTACATCGTGATGTCAAAGCAGAGAATATGCTATTAGACTTGAATTGGAACTTGAAAATAGCTGATTTTGGAGTTGCACGTGTTGAAGCACTCAATCCTAGTGACATGACTGGTGAAACTGGAACCCTTGGATATATGGCTCCGGAGGTTTTGGATGGTAAGCCTTACAATAGAAGATGTGATGTCTACAGCTTCGGCATTTGCTTGTGGGAAATTTATTGCTGTGATATGCCTTATCCAGATCTTAGCTTTGCCGATGTGTCATCTGCAGTTGTTCGTCAGAATTTACGACCCAGTATCCCGAAATGTTGTCCAAGTGTTCTAGCTAATATCATGAGGAAATGCTGGGACGGGAATCCGAACAAGCGGCCGGAAATGCAAGAGGTAGTGACAATGTTGGAAGCCATAGACACACGCAAAGGAAGAGGAATGATACCAGATGATGGTTCTGTAAACTGTTTCTGTTTTTCCCCAAGCCGCTAA 1167 0.4267 MMDLEVGEGGDKGPEMDVEAGGAENSKMKGNGSLSSKDRIFRADKIDLKNLDIQLEKHLSRVWSREIESKRPKEEWEIDMAKLDLRYIVAHGAYGTVYRGTYDSQDVAVKVLDWGEDGVATTAETAALRASFRQEVAVWQKLDHPNVTKFIGASMGLSDLKIPRTNSSVEDQNSLPSRACCVVVEYIPCGTLKQLLYKNRCKKLAYKVVIQLALDLSRGLSYLHSKRIVHRDVKAENMLLDLNWNLKIADFGVARVEALNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPSIPKCCPSVLANIMRKCWDGNPNKRPEMQEVVTMLEAIDTRKGRGMIPDDGSVNCFCFSPSR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1589 388 PRINTS Tyrosine kinase catalytic domain signature 184 197 IPR001245 GO:0004672|GO:0006468
Sto12g1589 388 PRINTS Tyrosine kinase catalytic domain signature 222 240 IPR001245 GO:0004672|GO:0006468
Sto12g1589 388 PRINTS Tyrosine kinase catalytic domain signature 288 310 IPR001245 GO:0004672|GO:0006468
Sto12g1589 388 PRINTS Tyrosine kinase catalytic domain signature 332 354 IPR001245 GO:0004672|GO:0006468
Sto12g1589 388 Gene3D Transferase(Phosphotransferase) domain 1 189 372 - -
Sto12g1589 388 Gene3D Phosphorylase Kinase; domain 1 72 163 - -
Sto12g1589 388 Pfam Protein tyrosine and serine/threonine kinase 88 361 IPR001245 GO:0004672|GO:0006468
Sto12g1589 388 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 21 381 - -
Sto12g1589 388 CDD STKc_MAP3K-like 89 361 - -
Sto12g1589 388 SUPERFAMILY Protein kinase-like (PK-like) 66 361 IPR011009 -
Sto12g1589 388 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 21 381 - -
Sto12g1589 388 SMART serkin_6 83 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1589 388 MobiDBLite consensus disorder prediction 1 18 - -
Sto12g1589 388 ProSiteProfiles Protein kinase domain profile. 83 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1589 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Sto12g1589 388 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1589 Sto-Chr12 11189186 11192626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1589 17 388 MAP Kinase Kinase Kinase AT3G22750 76.738 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sto12g1589 PK_Tyr_Ser-Thr 7.1e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1589 - - gmx:100803917 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1589 12 11189186 11192626 Sto12g1589 12 11189186 11192626 ECH