Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto12g1554 | ATGACGACGATGATGTTGGCGAATCGTTTCCAGAACGGTATCGAAACGGCGAAGCTCGTGTGGTCGCGAATTCCGAGCTCGGAGGAACCGCAGTTCCCCGACGACGCCGTTGGACTCTTGAAGAAGAGTGATGGAAGTGGCGTTGAGAGCCTTGACTATGAAGTCATCGAGAATCATGCTTATAGGAAAGAGCAGGCGCTAAGAGGGACGCTGTATGTGGGCTATTTGCTGGTGGTGAAATGGTTCTTTGCCTTGCTAATTGGAGTTGGTACTGGACTTGCTGCGGTTTTCATCAATATTTCTGTTGAAAACTTTGCCGGCTGGAAGTTCTCATTGACTTTTAATATTATTCAGAAATCATATGTGGCTGGATTTATTGTTTATGTCCTGATCAACTTAATTTTGGTCTATTCCTCGGTGTATATCATCTCACAGTTTGCACCAGCAGCTGCTGGATCTGGTATCCCTGAAATCAAGGGTTACTTGAACGGAGCTGATATTCACGGCATCCTTCTTTTTAGAACCTTGATTGGAAAGATATTTGGAAGCATTGGTTCAGTGGGAGGTGGCCTTGCTTTGGGTAAAGAAGGTCCTCTTGTTCATACGGGTGCTTGTATTGCTTCTTTGCTTGGACAAGTAACCTGTGGGTGTGCAGCTGGAGTAGCTGCTGCATTTAGAGCTCCGGTTGGTGGTGTATTGTTTGCATTGGAAGAGGTAACATCTTGGTGGAGGAGTCAACTAATGTGGCGTGTCTTCTTCACTTCTGCTGTTGTGGCTGTTGTGGTGCGAACTGTAATGGGGTGGTGTAAGAGTGGAAATTGTGGACATTTTGGCTCGGGTGGATTCATAATATGGGATACATCAGGGTTAAGATCTGAGCTTTCACCTTTTTTTTACTTCCAATTGAGTACTAAAATTTTACTTCTTTTGCCGTTCTTGACTGGCTTTACTTTTAGTGGTCAAGAGGATTATTCCTTTTCTGAGTTACTGCCGATGGCTGTTATTGGGGTTATTGGAGGTCTTCTAGGAGCCTTGTTTAACCAGCTTACTCTGTATGTAACTTCTTGGCGTCGTAATCATCTGCATAAGAAAGGGGGCCGAGTCAAGATTGTTGAAGCATGCCTTATCTCCTTGTTAACTTCAATTATTTCATTTGGCTTGCCACTTCTAAGAAAATGTAGTCCATGCCCTGAATCTGATCCTGTTTCTGGTATTGAATGTCCACGACCACCTGGAATGTATGGCAATTATGTAAATTTCTTTTGTAGCAAAGACAATGAATACAATGATCTTGCCACGATTTTTTTCAATACACAGGATGATGCGATAAGGAATTTGTTCAGTGCAAAAACAATACATGAGTACAGTGCTCAAAGTCTATTAACTTTTTTGGTTATGTTTTATTCTTTAGCAGTTATAACTTATGGTACTGCAGTTCCAGCCGGTCAGTTTGTTCCTGGAATAATGATAGGATCAACATATGGACGTCTTGTTGGCATGCTTGTTGTAAAATATTATGGAAAGCTCAATATTGAAGAGGGAACGTATGCTCTGCTAGGAGCTGCATCTTTCCTTGGAGGTTCAATGCGAATGACAGTGTCTCTCTGTGTCATTATGGTTGAAATAACTAATAACTTACAACTTTTACCTCTTATTATGCTTGTTCTTCTTATATCTAAGGCCGTTGGTGATGCTTTTAATGAGGGCTTATATGAAGAGCAGGCACGACTGAGGGGCATTCCATTACTAGATTCAAGGCCTAAATATGAGATGCGTAATATGACAGCAAAGGAGGCATGTGGGAGCAGAAGGATGGAGTCCACAACACTCTCCTCAATCATCCTTCATCAAGGGCTTGGGGCATCAATGGGTGTGGCATCCACTCTGGGAAAAATGGGGGTTAAGAATATGCCACCTTTTAACAAAAGTCTACTGAATATGTATGCATTAAATCATGGTAGTAAAATACAGCCTGTTATTATAAGATGCAGGGAAAAGGGGCTACCCGTGGTCTCCTTCCCCCGTGTTGTTAAGGTCGCAGATGTAGTTTCCATTCTGCGGAGCAATGAACACAATGGTTTTCCTGTAATTGATCACACAAGAAGTGGAGAACCACTAGTTATTGGATTAGTCCTTCGGAGctCCAATACCTTTCTTCTGGGCAGTCATCTATTGGTAATTCTGCATTCTAAGATTGATTTCCAGCATAGTCCTTTACCCAGTGATCCCAGAGGTGGGATCAGGCCAATAAGGCATGATTCTGTTGAATTTACTAAGCCTGTTTCTAGTAAAGGAATCTGTATAGATGATATACTTCTAAGTTCAGATGACTTAGAAATGTACGTAGATCTTGCACCTTTTATGAATCCGTCACCATATATTGTGCCTGAAGATATGTCTTTGACAAAGGTGTACAATCTTTTCCGCCAACTTGGTTTGAGGCATTTATTTGTTGTTCCACGCCCATCTCGCGTGCTTGGTTTGATAACAAGAAAAGATTTGTTGATTGAGGATTCTGCATTGTGA | 2526 | 0.4196 | MTTMMLANRFQNGIETAKLVWSRIPSSEEPQFPDDAVGLLKKSDGSGVESLDYEVIENHAYRKEQALRGTLYVGYLLVVKWFFALLIGVGTGLAAVFINISVENFAGWKFSLTFNIIQKSYVAGFIVYVLINLILVYSSVYIISQFAPAAAGSGIPEIKGYLNGADIHGILLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRTVMGWCKSGNCGHFGSGGFIIWDTSGLRSELSPFFYFQLSTKILLLLPFLTGFTFSGQEDYSFSELLPMAVIGVIGGLLGALFNQLTLYVTSWRRNHLHKKGGRVKIVEACLISLLTSIISFGLPLLRKCSPCPESDPVSGIECPRPPGMYGNYVNFFCSKDNEYNDLATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYSLAVITYGTAVPAGQFVPGIMIGSTYGRLVGMLVVKYYGKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLQLLPLIMLVLLISKAVGDAFNEGLYEEQARLRGIPLLDSRPKYEMRNMTAKEACGSRRMESTTLSSIILHQGLGASMGVASTLGKMGVKNMPPFNKSLLNMYALNHGSKIQPVIIRCREKGLPVVSFPRVVKVADVVSILRSNEHNGFPVIDHTRSGEPLVIGLVLRSSNTFLLGSHLLVILHSKIDFQHSPLPSDPRGGIRPIRHDSVEFTKPVSSKGICIDDILLSSDDLEMYVDLAPFMNPSPYIVPEDMSLTKVYNLFRQLGLRHLFVVPRPSRVLGLITRKDLLIEDSAL | 841 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto12g1554 | 841 | Gene3D | Clc chloride channel | 74 | 585 | - | - | |
Sto12g1554 | 841 | Pfam | Voltage gated chloride channel | 138 | 563 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Sto12g1554 | 841 | ProSiteProfiles | CBS domain profile. | 788 | 841 | IPR000644 | - | |
Sto12g1554 | 841 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC-D | 8 | 607 | - | - | |
Sto12g1554 | 841 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC-D | 669 | 839 | - | - | |
Sto12g1554 | 841 | Pfam | CBS domain | 787 | 835 | IPR000644 | - | |
Sto12g1554 | 841 | SUPERFAMILY | CBS-domain pair | 669 | 835 | IPR046342 | - | |
Sto12g1554 | 841 | SUPERFAMILY | Clc chloride channel | 58 | 585 | IPR014743 | - | |
Sto12g1554 | 841 | PRINTS | Chloride channel signature | 148 | 165 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Sto12g1554 | 841 | PRINTS | Chloride channel signature | 179 | 198 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Sto12g1554 | 841 | PRINTS | Chloride channel signature | 479 | 499 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Sto12g1554 | 841 | PRINTS | Chloride channel signature | 514 | 530 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Sto12g1554 | 841 | PRINTS | Chloride channel signature | 532 | 551 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Sto12g1554 | 841 | PRINTS | Chloride channel signature | 570 | 584 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Sto12g1554 | 841 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER | 669 | 839 | - | - | |
Sto12g1554 | 841 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER | 8 | 607 | - | - | |
Sto12g1554 | 841 | Gene3D | - | 669 | 836 | IPR046342 | - | |
Sto12g1554 | 841 | SMART | cbs_1 | 669 | 721 | IPR000644 | - | |
Sto12g1554 | 841 | SMART | cbs_1 | 791 | 839 | IPR000644 | - | |
Sto12g1554 | 841 | CDD | CBS_pair_voltage-gated_CLC_euk_bac | 669 | 835 | - | - | |
Sto12g1554 | 841 | PRINTS | Plant CLC chloride channel signature | 54 | 62 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Sto12g1554 | 841 | PRINTS | Plant CLC chloride channel signature | 431 | 447 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto12g1554 | Sto-Chr12 | 10835126 | 10845030 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto12g1554 | 5 | 839 | Ion Channels | AT5G26240 | 70.035 | 0.0 | 1080 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto12g1554 | K05016 | - | gmx:100811908 | 1155.97 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Sto12g1554 | 12 | 10835126 | 10845030 | Sto12g1554 | 12 | 10835126 | 10845030 | ECH |