Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1537 ATGGCGTTGTGGTGGTCCTTGCTCGTTCTGGCATTCGCTTATGCTATCTGCAGGTTCCTCCTCATGCTCATTCCTCCTAAAGTTCCTTCCATCGACGTTGATGCTTCCGATGTGTTGGATGATGGAAATCAAGCGCAGGAGAACAGCTTCATATATGTACCTCCAAGGGGGCAAGCGCAGCAATCGGGCAAGAAAGTTCAATGCTATGAACCTGCAACAATGAAATACTTAGGATATGTTCCTGCATTGACACCTACTGAGGTCAAGGAGCAGGTGACCAAGGTGAGGAAGGCGCAGAAAATGTGGGCTAAAACCAGCTTCAAGCAAAGACGCCAGTTTTTGCGTATACTTTTGCAGTATATAATCAGACATCAAGCACTTATATGCGAAATATCTTCCCGTGATACTGGAAAGACAATGGTAGATGCCTCTTTAGGAGAAATAATGACTACATGTGAGAAGATCAATTGGCTACTGTCAGAGGGTGAACAATGGCTAAAACCTGAATACCGATCTTCTGGACGTTCAATGCTGCATAAAAGAGCTAGAGTAGAATTTCATCCCCTTGGTGTTATTGGTGCTATTGTTTCGTGGAATTATCCTTTTCACAATATTTTCAATCCTATGCTAGCAGCACTTTTTTCTGGAAATGGTATTGTGATTAAGATCTCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGGATCATTCAATCAGCCCTTGCTGCCATAGGAGCTCCAGAGGATCTTGTTGAAGTCATAACAGGGTTTGCTGAAACAGGAGAAGCATTGGTGTCTTCTGTTGATAAAGTCATATTTGTTGGATCTCCTGGTGTTGGTAAGATGATAATGAGAAATGCCTCTGACACACTGATACCAGTTACATTAGAGCTTGGTGGAAAAGATGCATTTATTATGTGTGAAGATGTAGACGTGGACCATGTTGCACAAATTGCTGTCAGGGCTGTCCTGCAGTCAAGTGGACAAAATTGTGCTGGGGCTGAGCGATTTTATGTCCACAGGGATGTCTATGCGACTTTTGTCAGTAAAGTTACCAAAATCATAAAATCCGTTACATCTGGTCCACCGCTAGCTGGAAAGTATGATATGGGAGCTTTATGCATGCATGAACATTCTGAAAAGCTTGAAAGCCTTGTAAATGATGCCTTAGACAAAGGAGCTGAAATTGTTGCACGTGGAAGTTTTGGCCATATAGGCGAAGATGCAGTTGATCAATTTTTCCCCCCTACTGTGATTGTAAATGTGAATCACTCAATGAGATTGATGCAAGAAGAGGCATTTGGACCAATCATGCCAATAATGAAATTTAGCTCTGATGAAGAGGTTATCAAGCTTGCAAATGATTCAAAATATGGACTCGGCTGTGCTGTTTTCTCAGGCAATCAGACCCGCGCCAGAGAGATAGCTTCTCAGATACATTGTGGAGTGGCTGCAATTAATGATTTTGCAGCAACATACATGTGTCAgTCCCTGCCATTTGGGGGTGTGAAACACAGTGGATTTGGGCGATTTGGTGGTGCGGAAGGATTGCGAGCTTGCTGTCTTGTAAAATCAGTTGTGGAGGATCGATGGTGGCCATTTATCAAAACCAAGATACCTAAGCCCATCCAGTATCCCGTTGCAGAGAATGGATTTGAATTTCAGGAGTCACTTGTTGAAGCACTTTATGGGCTCAATATTTGGGATCGTTTGCGAGCATTGGTGAACGTGTTAAAAATGCTTACCGATCAAAATTCTCCCAGTAGCAGTAAGAAATTAAAGGACTGA 1791 0.4283 MALWWSLLVLAFAYAICRFLLMLIPPKVPSIDVDASDVLDDGNQAQENSFIYVPPRGQAQQSGKKVQCYEPATMKYLGYVPALTPTEVKEQVTKVRKAQKMWAKTSFKQRRQFLRILLQYIIRHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMLHKRARVEFHPLGVIGAIVSWNYPFHNIFNPMLAALFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMRNASDTLIPVTLELGGKDAFIMCEDVDVDHVAQIAVRAVLQSSGQNCAGAERFYVHRDVYATFVSKVTKIIKSVTSGPPLAGKYDMGALCMHEHSEKLESLVNDALDKGAEIVARGSFGHIGEDAVDQFFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVIKLANDSKYGLGCAVFSGNQTRAREIASQIHCGVAAINDFAATYMCQSLPFGGVKHSGFGRFGGAEGLRACCLVKSVVEDRWWPFIKTKIPKPIQYPVAENGFEFQESLVEALYGLNIWDRLRALVNVLKMLTDQNSPSSSKKLKD 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1537 596 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Sto12g1537 596 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Sto12g1537 596 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491
Sto12g1537 596 SUPERFAMILY ALDH-like 60 529 IPR016161 GO:0016491
Sto12g1537 596 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 562 - -
Sto12g1537 596 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Sto12g1537 596 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Sto12g1537 596 CDD ALDH_F15-22 69 531 - -
Sto12g1537 596 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1537 Sto-Chr12 10675933 10682495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1537 1 593 Aldehyde Dehydrogenase Gene Family AT3G66658 81.113 0.0 1045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1537 - - gmx:100802990 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1537 12 10675933 10682495 Sto12g1537 12 10675933 10682495 ECH