Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1536 ATGATGATGGGTGACCCTTTATCTAGGATTAGGTTCTATCCCCTTCATGTTATGTTGGTTGCTGAACTGATTGAAAATGGGGAGCTTGTGGGAGTGATTAGGGGATGCATTAAGAATGTAGGGACTCATTCTGGTTCAATCTTGAAGATGGGTTGCATTCTAGGCCTTAGGGTTTCTCCTAATTTTCGGAGAAAAGGGGTAGGACAAAAACTCATGAGTTCAGTTGAAGAATGGATGGTGAAAAATGGAGCTGAGTACACACTACTAGCCActgagaagaaaaatgaagctTCTAGAAACCTCTTCACAATCAAATGCAATTACTCTCACTTGAGCTCTCTACTCATATTTGTCCACCCCACAACCAACACTTTCCTCCCAAAGCATTTCTCAATTAGGCACATCAAAATAGAGAAGTTGATAATAGAAGAAGCAAGTTCTTTGTATGGGAAAATCTACTTGAAGCCCAAGGACTTGTTTCCAAAAGACATGGATGCCATTTTGAAGGAGAAACTCAACCTAGGCACATGGGTTTGTTACTATAAAGATGaagCTAATTATGATCATCATAATCCCAATCCTAATCCACTAGGGTTTCTTCATACCACTTTGAATCATGCAAGAGACAAGATTTTCCCATGTCTTAGAATGTTGGTGAGTAATGGTAGTAATTCATCACTCTCTAGACCTTTTGGGTTTCTCTTCATGTATGGCTTCCATGGAGAAGGAGACAACCTAGGGGAGCTCATGGAATGCATATGGAGATTCACTTCAAGATTGGGAGAAAGTATGAAGGGATGTAAAGTGATTATAACTGAGTTAGGGTTAGGTGATCCTCTTGTAAGTCATGTCCCTAAAAATAGTGCCTCCATGTCATACATAGAGGACCTTTGGTACATCAAGAGGCTTTCAGGCCATGGTGACCTAAAGGATGAAGTGGGGAATGTGTTTGTTGACCCTAGGgatttttag 972 0.3951 MMMGDPLSRIRFYPLHVMLVAELIENGELVGVIRGCIKNVGTHSGSILKMGCILGLRVSPNFRRKGVGQKLMSSVEEWMVKNGAEYTLLATEKKNEASRNLFTIKCNYSHLSSLLIFVHPTTNTFLPKHFSIRHIKIEKLIIEEASSLYGKIYLKPKDLFPKDMDAILKEKLNLGTWVCYYKDEANYDHHNPNPNPLGFLHTTLNHARDKIFPCLRMLVSNGSNSSLSRPFGFLFMYGFHGEGDNLGELMECIWRFTSRLGESMKGCKVIITELGLGDPLVSHVPKNSASMSYIEDLWYIKRLSGHGDLKDEVGNVFVDPRDF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1536 323 Pfam Acetyltransferase (GNAT) family 21 107 IPR000182 GO:0016407
Sto12g1536 323 Gene3D - 8 118 - -
Sto12g1536 323 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 2 189 - -
Sto12g1536 323 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 192 323 - -
Sto12g1536 323 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 142 IPR000182 GO:0016407
Sto12g1536 323 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 12 110 IPR016181 -
Sto12g1536 323 CDD NAT_SF 18 86 - -
Sto12g1536 323 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 189 - -
Sto12g1536 323 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 192 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1536 Sto-Chr12 10660985 10663070 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Sto12g1536 Acetyltransf_1 1.1e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1536 - - adu:107483424 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1536 12 10660985 10663070 Sto12g1536 12 10660985 10663070 ECH