Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1530 TTGCAGAACGAGGCACCTACCGGTATCGCTTACACGTCACAGAACCAATCAGTGGCAACATTTGTAGGAGCAGATAAAGTAGCATTCTATCATTGTGCATTTTATAGCACTCACAATACTCTCTTTGATTACAAAGGCAGACATTACTATGATTCTTGTTATATTCAAGGTTCCATTGATTTCATCTTTGGTCGTGGTAGATCTTACTTCcatAATTGTGAGATATTTGTGATAGATGACAAAAGAACAAGTATAAAAGGTTCAATCACAGCACACAACAGAGAGCATGCAAATGAAGAAACAGGATTTGTGTTTAACAAAGGAAGGGTATATGGAATAGGAGGGGTGTACCTAGGAAGGGCCAAGGGTGCCTTCTCTAGGGTTGTTTTTTCTCACATGTACCTTTCTGCCACTATTGTCCCTGAAGGCTGGGCCCACTGGAGTTATGCTGGAGAAACCAATAATTTATTCCATGGGGAGTACAAGAACCATGGACCAGGATCCAACACAACAATGCGTGCTCCTTGGTCTAAGCTCCTCACTGATAAAGAAGCTGCTCCCTTTAAGTCTATTGATTTTATTGATGGCAAGGATTGGCTTCCTGTTTGGctataa 615 0.4098 LQNEAPTGIAYTSQNQSVATFVGADKVAFYHCAFYSTHNTLFDYKGRHYYDSCYIQGSIDFIFGRGRSYFHNCEIFVIDDKRTSIKGSITAHNREHANEETGFVFNKGRVYGIGGVYLGRAKGAFSRVVFSHMYLSATIVPEGWAHWSYAGETNNLFHGEYKNHGPGSNTTMRAPWSKLLTDKEAAPFKSIDFIDGKDWLPVWL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1530 204 Pfam Pectinesterase 11 196 IPR000070 GO:0030599|GO:0042545
Sto12g1530 204 Gene3D - 1 203 IPR012334 -
Sto12g1530 204 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 203 - -
Sto12g1530 204 ProSitePatterns Pectinesterase signature 2. 55 64 IPR033131 -
Sto12g1530 204 PANTHER PECTINESTERASE 67-RELATED 2 203 - -
Sto12g1530 204 SUPERFAMILY Pectin lyase-like 11 202 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1530 Sto-Chr12 10600559 10602858 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1530 1 200 Carbohydrate Esterase AT1G05310 37.255 3.13e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1530 - - zju:107418947 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1530 12 10600559 10602858 Sto12g1530 12 10600559 10602858 ECH