Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1527 ATGCTTCAGGCATTGATGAATCTACTCTCTCTCTGTTGGAAGCCATTCGGGCCTGTCGCGAGCAATTTCGGTGGTGGGGCCGGCGGAAGAGAAGGCAAAGACGGCTTGCTCTGGTTCCGCGACATCGGAAAGTATGGCTCCGGCGATTTCTCCATGGCGGTGGTCCAGGCCAACCAGGTTCTCGAAGACCAGAGCCAGATCGAGTCTGGGCCTTTGGGCACCTTCGTAGGCGTGTACGATGGCCATGGAGGACCTGACGCATCTCGATACGTATGCGATCACTTGTTTCGGCACTTTCAAGCAATATCAGCTCAGTCACAGGGAGTTGTGACTGCTGAGACCATTCAAAGGGCATTTCTCCAAACAGAAGAAGGTTATACTTCTCTTGTGTCTGATTTATGGTGTACACGGCCTCAAGTCGCAACTGCCGGGACGTGTTGTCTAGTTGGAGTGATATTTCAGCAGACCCTCTTTGTGGCCAACGCCGGAGACTCCCGGGTTGTGTTGGGCAAGAAAGTTGGCAACACTGGAGGTATTGCTGCAATTCAGCTATCTATAGAACACAATGCAAATCTCGAGTCCATTAGACATGAACTTAAAGAATTACACCCACATGATCCTCAAATTGTTGTCCTCAAACATGGAGTGTGGAGAGTAAAAGGCATAATTCAGGTTTCTAAATCTATAGGTGATGTATATATGAAACACGCGCGGTTTAACCGGGAACCAATAAATGCAAAATTCAGACTTCCTGAGCCAATGAACATGCCTATCTTGTCTGCTAATCCATCTATTATTTCTCATCCTCTCCAACCAAATGATTCCTTCCTTATATTTGCCTCAGATGGTTTATGGGAGCACTTGAGTAATGAAAAAGCAGTTGATATTGTCCACAGCAATCCGCGCCTGGGTAGTGCCAAGAGACTTGTTAAGGCTGCCCTGCAAGAAGCCGCAAGAAAACGAGAGATGCGATATTCAGACCTTCGGAAGATTGACAAGAAGGTTCGACGCCATTTTCATGACGATATATCTGTTATTGTTTTATTCTTAAACCACGATCTTATATCCAAAGGCGCAGTGATAGATCCTCCACTTTCAATTCGAAGTGCCCTTGATCACTGA 1122 0.4679 MLQALMNLLSLCWKPFGPVASNFGGGAGGREGKDGLLWFRDIGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGVYDGHGGPDASRYVCDHLFRHFQAISAQSQGVVTAETIQRAFLQTEEGYTSLVSDLWCTRPQVATAGTCCLVGVIFQQTLFVANAGDSRVVLGKKVGNTGGIAAIQLSIEHNANLESIRHELKELHPHDPQIVVLKHGVWRVKGIIQVSKSIGDVYMKHARFNREPINAKFRLPEPMNMPILSANPSIISHPLQPNDSFLIFASDGLWEHLSNEKAVDIVHSNPRLGSAKRLVKAALQEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFLNHDLISKGAVIDPPLSIRSALDH 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1527 373 CDD PP2Cc 50 350 IPR001932 -
Sto12g1527 373 ProSitePatterns PPM-type phosphatase domain signature. 75 83 IPR000222 GO:0043169
Sto12g1527 373 ProSiteProfiles PPM-type phosphatase domain profile. 49 350 IPR001932 -
Sto12g1527 373 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 373 - -
Sto12g1527 373 Pfam Protein phosphatase 2C 73 320 IPR001932 -
Sto12g1527 373 SUPERFAMILY PP2C-like 59 351 IPR036457 -
Sto12g1527 373 Gene3D - 41 359 IPR036457 -
Sto12g1527 373 PANTHER ALPHABET, ISOFORM E-RELATED 3 373 - -
Sto12g1527 373 SMART PP2C_4 36 348 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1527 Sto-Chr12 10581016 10584179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1527 1 370 PP2C-type Phosphatase Gene Family AT4G38520 59.103 1.56e-161 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1527 K01102 - gmx:100811922 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1527 12 10581016 10584179 Sto12g1527 12 10581016 10584179 ECH