Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1523 ATGTTCAAGAGACCCATCAAACTTATTTGCCTATTCGACTCTGTCAGTTATATTTCTCAGAAATCGAAGAAACCTTCCGATTCCGATTCCGATTTCGAATCGGCGTTCCTTCATCACATGGCCTCGTCTCTGATCtcatcaaatccactcccgAACTCCGATCGTTCACGCGACGCCGCCTccaagaggaggaggaagaagaaggcgTCGGAGCTCAAGCACCAGCACCACCACAACCAacagcaagatcagattcaacaCTACACCAAATGGAAATCTCACGCTCAGCAGCAAATCTACTCCTCCAAGCTCCACCAAGCCCTGGCTCGAGTCAACCACGGCGATGCGCCGCGCCGCGGGAAGGCCGTGCGCGAGGCCGCCGATAGGGCTCTGGCCGTCGCCGCCAAGGGGAGGACTCGGTGGAGCCGAGCGATCCTGACGAGCCGGCTCAAAATCAAGTTCAGGAAGCAGAAGAAGCCGAGGATTACGGCCGCGGCGGCGGCGGTTACCGGGAGCAACCGGTGGAGGAAGCCGCCGCGAGTGAGCGTTCTGCGGTTGAAAGGGAAGAGCGTACCGGGAGTGCAGAGGAAAGTGAGGTTTCTCGGCCGGTTGGTTCCCGGTTGCCGGAAAGAACCGTTCCCGGTGATTCTAGAAGAAACGATCGATTACATATCGGCGCTTCAGATGCAAATCCGAGCCATGAGCGATCTCGCCGATCGCCTCTCCACCAATTCAATCTcaaatccttcttcttcttcttcaaccttgTAA 771 0.5019 MFKRPIKLICLFDSVSYISQKSKKPSDSDSDFESAFLHHMASSLISSNPLPNSDRSRDAASKRRRKKKASELKHQHHHNQQQDQIQHYTKWKSHAQQQIYSSKLHQALARVNHGDAPRRGKAVREAADRALAVAAKGRTRWSRAILTSRLKIKFRKQKKPRITAAAAAVTGSNRWRKPPRVSVLRLKGKSVPGVQRKVRFLGRLVPGCRKEPFPVILEETIDYISALQMQIRAMSDLADRLSTNSISNPSSSSSTL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1523 256 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 48 254 - -
Sto12g1523 256 CDD bHLH_AtIBH1_like 183 238 IPR044549 GO:0006355
Sto12g1523 256 MobiDBLite consensus disorder prediction 43 92 - -
Sto12g1523 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 198 245 IPR036638 GO:0046983
Sto12g1523 256 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 48 254 IPR044660 GO:0006355
Sto12g1523 256 MobiDBLite consensus disorder prediction 60 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1523 Sto-Chr12 10557332 10559179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1523 88 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 52.571 9.66e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1523 - - tcc:18603680 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1523 12 10557332 10559179 Sto12g1523 12 10557332 10559179 ECH