Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1520 ATGGAGAAGAATGCAAAAGATGGAAGAATAGGGAACAAGGGGCCACGATCACATGCACACGAGCCaatcttccctctctttcctCCCGCCACGTGTGCGCCCCCTGAAATGACACCCTTCACACCTCAGCCGGTTACCGGTCAACAACACGCGGAGAAAccgaaaaagaaaaagcaaaagaaacaaAGAGAGCCCAGATTTGCGTTCATGACAAAAAGCGAAGTGGATCACCTTGACGATGGCTATAGATGGCGCAAGTACGGCCAAAAGGCCGTTAAAAACAGCCCTTATCCCAGGAGCTATTATCGTTGCACCACAGGAGGGTGCGGCGTGAAGAAGAGGGTGGAGCGATCCTCAGACGACCCGACCGTGGTGGTAACGACGTACGAGGGGCAGCACACGCACCCGAGTCCGGTCTCGGCGACTCGGGCCAGCCTGGGCTTCATGCATGAACCCGGATTCGGATCATCGGGAAATAATCCAATCAAGAAGGTATAg 498 0.502 MEKNAKDGRIGNKGPRSHAHEPIFPLFPPATCAPPEMTPFTPQPVTGQQHAEKPKKKKQKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTGGCGVKKRVERSSDDPTVVVTTYEGQHTHPSPVSATRASLGFMHEPGFGSSGNNPIKKV 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1520 165 Gene3D WRKY domain 63 139 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto12g1520 165 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 49 146 - -
Sto12g1520 165 SUPERFAMILY WRKY DNA-binding domain 70 138 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto12g1520 165 MobiDBLite consensus disorder prediction 1 68 - -
Sto12g1520 165 MobiDBLite consensus disorder prediction 27 41 - -
Sto12g1520 165 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 49 146 IPR044810 GO:0003700
Sto12g1520 165 MobiDBLite consensus disorder prediction 1 16 - -
Sto12g1520 165 Pfam WRKY DNA -binding domain 79 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto12g1520 165 ProSiteProfiles WRKY domain profile. 73 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto12g1520 165 SMART WRKY_cls 78 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1520 Sto-Chr12 10497890 10504262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1520 53 158 WRKY Transcription Factor Family AT2G47260 72.642 1.62e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto12g1520 WRKY 2.6e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1520 - - gmx:100788697 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1520 12 10497890 10504262 Sto12g1520 12 10497890 10504262 ECH