Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1502 ATGGCTCCATCCACAAAGtctctgattttgccattattACTATTAACAATGGCTTTCTCATCAATATTATTCAAAGGAAGTGAAGCAATTTATCCATTTGATAAAGTAGTAGTGGaaattttcaatgatttagcTTCAAAAGAGGACCTAACTCTTCACTGCAAAGCCAAGCATGATGATCGAGGAGAGCACACCATCAAATCGGGGGAATCTTACCGTTTCAAATTCTATCCAAACCCTGTTCTTTTGGTATCATTGTACTTTTGTAGTTTCAGGTGGCAATCTGATCAAAAACTTCACTACATTAACATATACATGCAAAAACGAGATAGTTTCAGGTGGCAATCTGATCAAAAACTTCACCACATTAACATATACAGTGAAAAACGAGATGGGTGTTTATGGTGTGGTTGGACTGTGAAGGAAAGAGGTCCATGCACTTATGATTTTGATACAAAAACTTTTGATATTTGCTATGGATGGCTCCCAAGTCTAGAATCTGCTCTTGCTGCATCAAATGTTACCAATGCTAATTCTACTATTGAGTTTCATGtttga 558 0.3441 MAPSTKSLILPLLLLTMAFSSILFKGSEAIYPFDKVVVEIFNDLASKEDLTLHCKAKHDDRGEHTIKSGESYRFKFYPNPVLLVSLYFCSFRWQSDQKLHYINIYMQKRDSFRWQSDQKLHHINIYSEKRDGCLWCGWTVKERGPCTYDFDTKTFDICYGWLPSLESALAASNVTNANSTIEFHV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1502 185 Pfam Plant self-incompatibility protein S1 38 161 IPR010264 -
Sto12g1502 185 PANTHER S-PROTEIN HOMOLOG 18-RELATED 24 110 - -
Sto12g1502 185 PANTHER S-PROTEIN HOMOLOG 18-RELATED 111 161 - -
Sto12g1502 185 PANTHER - 111 161 IPR010264 -
Sto12g1502 185 PANTHER - 24 110 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1502 Sto-Chr12 10336951 10339940 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1502 17 161 Carbohydrate Esterase AT3G16970 31.373 2.97e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1502 - - mtr:MTR_6g004340 102.449