Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1500 ATGGTGATGCCATTAGTGCTTTCAGCCGTTTTTAAAGGAAGTGAAGCATTTCCGTTTACAAAAGTAACAGTGGGAATTACCAATGATTTAGCTTCAAAAGAAGACCTAACTCTTCACTGCAAGGCCAAGCATGATGACAGAGGAGAACACACCATCAAATATGGGGAATATTACACTTTCAAATTCACTAGAAACCCTATTATAACGGTATCTTTGTATTATTGTAGTTTCAGGTGGCAATCTGATCAGAATCTTCACTTCATTAACATATACAGCCAAAGAAGAGATAGGTGTGTAGGGTGTGGTTGGATTGTGAAGGAAGGAGGCCCATGTGCTTATGATTTTGATACAAAGACTTATGATATTTGCTATGGATGGATCCCAAGTCTAGAAGATGCTCTTGCTGCATCAAATGTTACCAATGCTAATTCTACTATTGAGTTTCACGTTTGA 453 0.3797 MVMPLVLSAVFKGSEAFPFTKVTVGITNDLASKEDLTLHCKAKHDDRGEHTIKYGEYYTFKFTRNPIITVSLYYCSFRWQSDQNLHFINIYSQRRDRCVGCGWIVKEGGPCAYDFDTKTYDICYGWIPSLEDALAASNVTNANSTIEFHV 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1500 150 PANTHER S-PROTEIN HOMOLOG 18-RELATED 13 126 - -
Sto12g1500 150 PANTHER - 13 126 IPR010264 -
Sto12g1500 150 Pfam Plant self-incompatibility protein S1 23 126 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1500 Sto-Chr12 10325714 10326533 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1500 14 126 Carbohydrate Esterase AT3G16970 33.613 1.13e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1500 - - gra:105767636 97.4413