Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1490 ATGTTTGAATCAAGATTGCCCAGTTTGATTGCCGATATGAATATGAATGTTATTCTGTGTGTTGTGTTCCTATGCTTCTACCCTTTGGCTATTCCTTTCATTAAAGCATCAGAAATAAATGCAGAACCAACCTATGAGCTTGATAGGGTCATTAATCTTCCTGGCCAACCTTCAAGCCCGCCACTCTCACATTTTTCAGGTTATATCACTGTCAATCATGATCATGGGAGGGCCCTCTTCTACTGGTTCTTTGAAGCTCAATCTGAACCGTCCAAGAAGCCTCTCCTCCTCTGGCTCAATGGAGGACCTGGGTGCTCCTCTATTGGGTATGGTGCGGTTGTTGAGATTGGACCTCTTACAGTGAACAAAAATGGTGAAGGACTAGAATTCAATAACTACTCCTGGAATCAAGAGGCAAACTTGTTATTTGTGGAGTCCCCAGTTGGAGTTGGATTTTCTTACACCAACACTTCTTCTGATCTCACCATACTAGAGGATAGTTTTGTGGCTGAGGATGCCTACAATTTCTTGGTGAATTGGCTGGAACGATTCCCACAGTTTAAATCCCGGGATTTCTTTATATCAGGAGAGAGTTATGCAGATAGAAGCAAATGCCCATTTATCAATCTTAAAGGTTTTATTGTGGGAAATCCAGAAACTGAAGATTACTATGACTACAAAGGCCTTCTGGAATATGCATGGAGCCATGCAGTCATATCAGATCAGCAGTATGATAAAGCAAAACAAGTATGTGATTTTAAGCAATTTGAATGGTCTAAGGAATGCAACGAGGCCATGAATATAGTCTTCCAGGATTACTCAGAGATAGATATCTACAACATTTATGCTCCAGCATGTCGTCTAAATACCACTTCCTCCATAGCTTATGATACTGATAGCAACAGTATTGGCTCTGAATCACTTACTAAGGTAAGAAATAGTTATAGACTAGGGAGGATGAGAATTTTTGGAGGCTATGATCCATGTTATTCCACATATGCAGAAGAATATTTCAATAGGATAGATGTTCAGTCATCTTTTCATGCTGGTGTGAAAGGAAAAGGAGGGAACACAAATATAACATGGAAGACATGCAATGATTCCATATTAAGGACATACAATTTCTCTGTTTTCTCGGTCCTACCCATCTACACCAAACTCATCAAAGGTGGCCTCAAGGTGTGGATTTACAGTGGGGACACAGATGGCAGAATACCAGTGATAGGGACAAGATATTGCGTTGAGGCTCTTGGATTACCTATCAAGTCTAGTTGGCGATCTTGGTACCATGATAATCAGGTTGGAGGGAGGATGGTGGAGTATGAAGGACTAACATATGTGACAATTAGAGGAGCAGGTCATTTGGTGCCTCTCAATAAGCCCAATGAAGCTCTTTCCCTTATTCATTCTTTCCTAACAGGAGACCATCTTCCTACTACTCGTACATGA 1449 0.4099 MFESRLPSLIADMNMNVILCVVFLCFYPLAIPFIKASEINAEPTYELDRVINLPGQPSSPPLSHFSGYITVNHDHGRALFYWFFEAQSEPSKKPLLLWLNGGPGCSSIGYGAVVEIGPLTVNKNGEGLEFNNYSWNQEANLLFVESPVGVGFSYTNTSSDLTILEDSFVAEDAYNFLVNWLERFPQFKSRDFFISGESYADRSKCPFINLKGFIVGNPETEDYYDYKGLLEYAWSHAVISDQQYDKAKQVCDFKQFEWSKECNEAMNIVFQDYSEIDIYNIYAPACRLNTTSSIAYDTDSNSIGSESLTKVRNSYRLGRMRIFGGYDPCYSTYAEEYFNRIDVQSSFHAGVKGKGGNTNITWKTCNDSILRTYNFSVFSVLPIYTKLIKGGLKVWIYSGDTDGRIPVIGTRYCVEALGLPIKSSWRSWYHDNQVGGRMVEYEGLTYVTIRGAGHLVPLNKPNEALSLIHSFLTGDHLPTTRT 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1490 482 Gene3D - 329 369 - -
Sto12g1490 482 SUPERFAMILY alpha/beta-Hydrolases 48 478 IPR029058 -
Sto12g1490 482 ProSitePatterns Serine carboxypeptidases, histidine active site. 444 461 IPR033124 GO:0004185
Sto12g1490 482 Gene3D - 380 474 - -
Sto12g1490 482 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 479 IPR001563 GO:0004185|GO:0006508
Sto12g1490 482 Pfam Serine carboxypeptidase 54 473 IPR001563 GO:0004185|GO:0006508
Sto12g1490 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Sto12g1490 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Sto12g1490 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Sto12g1490 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 444 457 IPR001563 GO:0004185|GO:0006508
Sto12g1490 482 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 30 479 - -
Sto12g1490 482 Gene3D alpha/beta hydrolase 44 288 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1490 Sto-Chr12 10254905 10258544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1490 362 477 Calmodulin-binding Proteins AT2G22960 32.479 3.77e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1490 K16297 - gmx:100792930 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1490 12 10254905 10258544 Sto12g1490 12 10254905 10258544 ECH