Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1479 ATGTCTATGTATAATTTCCAACACTCTGCCCCAGAGTTCATGAATGAAGGCAGAGTCTCGGATAAATCATATGTTCATTCCTTTGGGGCGGTTTTGGTGGAATTGGTATGTGGAAAGACACCCAGGGACGATGCCGTGAACTTCATCGCCAACATCGCGACCCAATTCCTATGGTTCAGAACGATTTGCCTCAACGATCGCACGATTGGATCGATCTCGGTGTGCTCCTACGCGGGTGGCGATAAGTGCAGAGGGAAATCGGGGGAGATCGGGTATGTTTTGGGGTCAAAGTATTGGGGAAAGGGGATAGCGACGAAGGCCGTGAAAGAGAGCGTAGGCGTTGTGTTCGATGAAATGCGTGAGTTGGAGAGGGTGGAGGCTTTGGTGGATGTGGAGAATGTGGGGTCTCAGAGAGTGCTTCAGAAGTGTGGGTTTGTGAGGGAGGGAGTGTTGAGGAAGTATTTGTATATCAAAGGGAAGAGTAGGGATATGGTGATGTTCAGTGTTCTTTCAACGGATCCTCGAACTTGA 531 0.4934 MSMYNFQHSAPEFMNEGRVSDKSYVHSFGAVLVELVCGKTPRDDAVNFIANIATQFLWFRTICLNDRTIGSISVCSYAGGDKCRGKSGEIGYVLGSKYWGKGIATKAVKESVGVVFDEMRELERVEALVDVENVGSQRVLQKCGFVREGVLRKYLYIKGKSRDMVMFSVLSTDPRT 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1479 176 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 163 IPR000182 GO:0016407
Sto12g1479 176 Gene3D - 29 172 - -
Sto12g1479 176 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 40 174 - -
Sto12g1479 176 SUPERFAMILY Protein kinase-like (PK-like) 5 46 IPR011009 -
Sto12g1479 176 Pfam Acetyltransferase (GNAT) domain 58 146 IPR000182 GO:0016407
Sto12g1479 176 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 40 174 - -
Sto12g1479 176 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 41 170 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1479 Sto-Chr12 10169702 10170318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1479 3 60 Trihelix Transcription Factor Family AT1G26150 34.483 3.71e-07 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Sto12g1479 Acetyltransf_3 3.4e-19 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1479 - - ccaj:109810875 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1479 12 10169702 10170318 Sto12g1479 12 10169702 10170318 ECH