Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1478 ATGACAAAACTATCATACTTGCATGAGCCAGGAGTTCTGCACAACTTGGCAGCTAGATATGAACTCAACGAAATCTATACCTACACTGGAAATATCCTGATTGCCATAAACCCATTTCAAAGATTACCACATCTATATGATACTCACATGATGGAACAGTACAAAGGAGCTGCCTTTGGAGAGTTGAGTCCCCATGTTTTTGCAGTTGCAGATGTTGCTTACAGAGCAATGATCAATGAGGGAAAAAGCAACTCAATCTTGGTTAGCGGTGAAAGTGGTGCTGGTAAGACAGAGACAACAAAGATGCTCATGCGTTATCTTGCATACCTAGGAGGCCGATCTGGAGTAGAAGGGCGAACAGTTGAACAACAAGTTCTAGAATCTAACCCAGTTCTTGAAGCATTTGGCAATGCAAAAACAGTTAGAAACAATAACTCAAGTCGATTTGGTAAATTTGTTGAGATCCAATTTGACAAGAAGGGAAGGATCTCAGGGGCAGCTATACGTACTTACTTGCTTGAGAGGTCTCGTGTTTGCCAAATTTCAGATCCTGAAAGAAATTACCATTGCTTTTACCTTCTCTGTGCAGCACCAGCTGAGGAAAAAGAGAAGTATAAGCTGGGAAGCCCTAGCTGCTTCCATTACTTAAATCAATCAAAGTGCTATGAACTGGATGGAGTTGATGATGCACATGAATATCTTGCTACTCGAAGGGCAATGGATATTGTTGGCATCAGTGAGGAAGAGCAGGAAGCTATTTTTAGGGTTGTAGCAGCAATTCTGCACCTTGGAAATATTGAATTTGCAAAAGGAGAGGAGATTGACTCTTCTGTCATTAAAGATGAGCAGTCTAGATTCCATCTTAATACGACTGCTGAACTTCTGAAGTGTGATGCTAAGAGCTTGGAAGATGCACTGATCAAACGTGTTATGGTAACACCTGAGGAGGTTATTACAAGAACCCTTGATCCTGTTGCAGCTCTTGGTAGCAGGGATGCATTAGCTAAAACCATTTATTCGCGCTTATTTGATTGgCTTGTGGAGAAAATTAACAATTCAATTGGGCAAGATCCAAATTCAAAATCGATCATCGGAGTTCTTGATATCTATGGATTTGAAAGTTTTAAGTTCAATAGTTTTGAGCAGTTCTGTATTAATTTCACTAATGAAAAGCTGCAACAACATTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATACACCAAAGAAGAGATCAATTGGAGTTACATAGAGTTTGTTGATAACCAAGATGTCTTGGATCTTATTGAGAAGAAACCTGGAGGGATAATTGCACTTCTTGATGAAGCCTGTATGTTTCCCAAGTCTACACATGAAACATTTGCTCAGAAGTTGTATCAGACATTCAAAAACAACAAGCGCTTTGTCAAACCTAAACTTTCTCGGACTAGTTTCACCATATGTCATTATGCTGGGGAGGTTTTATACCAGGCTGATATGTTTCTTGACAAAAACAAGGATTATGTGGTTGCAGAACATCAGGCCCTACTGACTGCCTCAACATGCTCATTTGTGGCAGCTCTATTCCCCCCTTCTCCAGAGGAGTCATCAAAATCATCCAAGTTTTCTTCAATTGGATCTCGCTTTAAGTTACAACTTCAATCTTTGATGGAGACCCTAAGTTCAACAGAACCTCACTATATCAGATGTGTGAAGCCCAACAATGTCCTCAAGCCTGCTATTTTTGAAAACCTCAACATTATCCAACAATTACGCTGTGGTGGTGTACTTGAGGCAATTAGAATCAGCTGTGCTGGATATCCTACTAGACGGACATTTTATGAGTTTCTTAATCGATTTGGTGTTCTTGCCCCCGAAGTTCTGGATGGAAATTATGATGACAAAGTGGCATGCCAAATGATCCTAGATAAAATGGGGTTGAAAGGCTACCAGATAGGGAAGACAAAGGTTTTCCTCAGAGCTGGTCAGATGGCTGAGTTGGATGCTAGAAGAGCTGTGGTTCTTGGAAATGCAGCCAGAACCATCCAAAGGCAAATACGTACCCATATTGCACGCAAGGAATTCATTGAATTGCGTCAAGCTGCAATTCATTTGCAATCTTACTTGCGAGGCATATTGGCTCGGAAACTCTACAACCAGTTGCGGCGTGAAGCAGCAGCCGTGAAAATAGAAAAGATCTTCAGAGGATATATTGCTAAGAAATCTTACTTAACAATACGATCATCTGCAATCACATTACAGACAGGTTTAAGGGCTATGAAGGCTCGTGATGAATTTAGATTTAGAAAGCAGACAAACGCTGCTATTCATATGCAGGCTCATGTTCGTCGGCTTATTGCATATTCTTATTATAAAAGATTGCAGAAGGCTGCAATTGTCACTCAATGTGGTTGGAGGGGAAGGGTTGCTCGGAGGGAACTCAGAAAGCTTAAAATGGCTGCAAGAGAGACTGGGGCCCTTCAAGAAGCTAAAAACAAGTTAGAAAAGCGTGTTGAAGAACTTACCTGGCGATTGCAAATTGAGAAGCGATTAAGAactgatttggaagaggaaaaagcacaagaagttGCCAAGTTGAAGGATGCATTGCAAGCAATGCAAATACAAGTAGAAGAAGCAAATGCCAAGGTCATCAAAGAACGCGAGGCAGCTCGAAAAGCAATTGAAGAAGCACCTCCAGTTATTAAGGAAACACCTGTTATAATTCAAGATACTGAAAAGCTTAATTCCTTGATGGCTGAGGTCAATAGTTTGAAGGAAACACTCTTAATGGAAAGAGAGGCTAAAGAAGAGGCCAGGAAAGCTCATGCAGATGCTGAGGCTAGAAATGCTGAGCTGGTTAAAAAAGTTGAAGAGTCTGATCGCAAAGTGGATCAACTTCAGGAATTGGTTCAGAGATTGGAGGACAAAGTTTCCAATACAGAGTCGGAAAATCAAGTTCTTCGCCAGCAAGCATTGGCTGTATCACCAACTGCGAAAGCTCTATCTGCAAGACCAAAGTCGGTGATTATACAGAGGACGCCAGAAAATGGAAATGCTGTAAATGGAGAATCAAAAATTGTATCCGACATGACTCTTGCTTTATCAAATGTACGTGAACCTGAATCTGAGGGAAAGCCACAAAAATCGCTCAACGAAAAGCAGCAAGAAAACCAGGACCTTTTGATTAAGTGCATATCACAAGATTTGGGATTTTCTGGGGGCAAACCTATTGCTGCATGCATGATATATAAATGCCTTCTTCATTGGAGGTCATTTGAAGTAGAAAGAACAAGTGTGTTTGACCGTATTATTCAAACAATATCTTCAGCTGTTGAGGGCCAGGATAATGCTGATGTATTATCCTACTGGTTGTCTAATACATCCACTTTGTTATTGCTGCTTCAACGCACTCTCAAAGCAACTGGAGCAGCTAGCTTAACACCACAACGGCGGAGAACAGCATCGGCTTCTCTGTTTGGAAGAATGTCCCAAGGGCTAAGGGCATCTCCTCAAACTGCTGGGTTACCGTTTCTAAATGGTCGAGGGCTTAGTAGATTGGATGATTTGAGGCAAGTGGAGGCAAAATATCCAGCACTGCTTTTTAAGCAGCAGCTAACTGCTTTCCTGGAAAAAATATATGGAATGATAAGAGACAACCTTAAGAAGGAGATATCTCCATTACTTGGATTGTGTATACAGGCTCCTAGGACTTCGCGTCAAGGTTTAGTGAAAGGACGCTCACATGCTAATGCAGTTGCACAGCAAGCTTTAATTGCTCACTGGCAAAGTATTGTGAAAAGCTTAAACAACTCTCTGAAGATAATGAAAGCAAACTATGTGCCCCCTTTCTTGGTCTGTAAAGTGTTTACTCAGATATTCTCATTCATTAATGTTCAACTATTCAACAGTCTTCTGTTGCGTCGCGAGTGTTGTTCATTCAGTAATGGAGAATACGTAAAGACAGGTTTGGCTGAATTAGAACAGTGGTGCAATGAGGCAACAGAGGAGTATGCTGGCTCAGCTTGGGAGGAACTGAAGCATATCAGGCAGGCTGTTGGATTCCTGGTTATAcatcaaaaacccaaaaagaCCTTGAATGAAATAACAAAGGAGCTTTGCCCGGTTCTCAGTATACAACAGTTATACAGGATCAGTACAATGTACTGGGACGATAAATATGGCACACACAGCGTGTCTTCTGATGTTATAGCAAAAATGAGAACTATGATGTCCGAAGACTCTGGCAATGCCGTCAGCAGTTCCTTCCTTCTGGACGATGACTCGAGTATCCCCTTCTCGGTGGATGACATTTCCAAATCCATGCAACAAGTAGACGTAGCCGATGTGGATCCTCCTCCGTTGATACGTGAAAACTCGGGATTCACGTTCCTATTATCGCGCTCGGAGTGA 4395 0.4102 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPAEEKEKYKLGSPSCFHYLNQSKCYELDGVDDAHEYLATRRAMDIVGISEEEQEAIFRVVAAILHLGNIEFAKGEEIDSSVIKDEQSRFHLNTTAELLKCDAKSLEDALIKRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFVKPKLSRTSFTICHYAGEVLYQADMFLDKNKDYVVAEHQALLTASTCSFVAALFPPSPEESSKSSKFSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNVLKPAIFENLNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLDGNYDDKVACQMILDKMGLKGYQIGKTKVFLRAGQMAELDARRAVVLGNAARTIQRQIRTHIARKEFIELRQAAIHLQSYLRGILARKLYNQLRREAAAVKIEKIFRGYIAKKSYLTIRSSAITLQTGLRAMKARDEFRFRKQTNAAIHMQAHVRRLIAYSYYKRLQKAAIVTQCGWRGRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIEKRLRTDLEEEKAQEVAKLKDALQAMQIQVEEANAKVIKEREAARKAIEEAPPVIKETPVIIQDTEKLNSLMAEVNSLKETLLMEREAKEEARKAHADAEARNAELVKKVEESDRKVDQLQELVQRLEDKVSNTESENQVLRQQALAVSPTAKALSARPKSVIIQRTPENGNAVNGESKIVSDMTLALSNVREPESEGKPQKSLNEKQQENQDLLIKCISQDLGFSGGKPIAACMIYKCLLHWRSFEVERTSVFDRIIQTISSAVEGQDNADVLSYWLSNTSTLLLLLQRTLKATGAASLTPQRRRTASASLFGRMSQGLRASPQTAGLPFLNGRGLSRLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRQGLVKGRSHANAVAQQALIAHWQSIVKSLNNSLKIMKANYVPPFLVCKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKTGLAELEQWCNEATEEYAGSAWEELKHIRQAVGFLVIHQKPKKTLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSSDVIAKMRTMMSEDSGNAVSSSFLLDDDSSIPFSVDDISKSMQQVDVADVDPPPLIRENSGFTFLLSRSE 1464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1478 1464 Gene3D Myosin VI head, motor domain, U50 subdomain 246 535 - -
Sto12g1478 1464 PRINTS Myosin heavy chain signature 26 45 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto12g1478 1464 PRINTS Myosin heavy chain signature 83 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto12g1478 1464 PRINTS Myosin heavy chain signature 130 157 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto12g1478 1464 PRINTS Myosin heavy chain signature 363 391 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto12g1478 1464 PRINTS Myosin heavy chain signature 416 444 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto12g1478 1464 PANTHER MYOSIN 1 1461 - -
Sto12g1478 1464 ProSiteProfiles IQ motif profile. 692 721 IPR000048 GO:0005515
Sto12g1478 1464 Pfam IQ calmodulin-binding motif 693 712 IPR000048 GO:0005515
Sto12g1478 1464 Pfam IQ calmodulin-binding motif 671 689 IPR000048 GO:0005515
Sto12g1478 1464 Pfam IQ calmodulin-binding motif 790 809 IPR000048 GO:0005515
Sto12g1478 1464 ProSiteProfiles Myosin motor domain profile. 1 666 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto12g1478 1464 ProSiteProfiles IQ motif profile. 717 746 IPR000048 GO:0005515
Sto12g1478 1464 Coils Coil 902 985 - -
Sto12g1478 1464 CDD MyosinXI_CBD 1047 1430 IPR037975 GO:0007015
Sto12g1478 1464 ProSiteProfiles IQ motif profile. 788 817 IPR000048 GO:0005515
Sto12g1478 1464 ProSiteProfiles IQ motif profile. 671 695 IPR000048 GO:0005515
Sto12g1478 1464 SMART iq_5 668 690 IPR000048 GO:0005515
Sto12g1478 1464 SMART iq_5 787 809 IPR000048 GO:0005515
Sto12g1478 1464 SMART iq_5 691 713 IPR000048 GO:0005515
Sto12g1478 1464 SMART iq_5 764 786 IPR000048 GO:0005515
Sto12g1478 1464 SMART iq_5 739 761 IPR000048 GO:0005515
Sto12g1478 1464 SMART iq_5 716 738 IPR000048 GO:0005515
Sto12g1478 1464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 719 IPR027417 -
Sto12g1478 1464 SMART DIL_2 1282 1389 IPR002710 -
Sto12g1478 1464 Gene3D - 186 244 - -
Sto12g1478 1464 PANTHER MYOSIN-5 1 1461 - -
Sto12g1478 1464 Gene3D - 601 664 - -
Sto12g1478 1464 SMART MYSc_2a 1 667 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto12g1478 1464 ProSiteProfiles IQ motif profile. 765 791 IPR000048 GO:0005515
Sto12g1478 1464 Pfam Myosin head (motor domain) 1 654 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto12g1478 1464 CDD MYSc_Myo11 10 654 IPR036018 -
Sto12g1478 1464 Gene3D - 719 766 - -
Sto12g1478 1464 Gene3D - 669 718 - -
Sto12g1478 1464 Gene3D - 767 816 - -
Sto12g1478 1464 Pfam DIL domain 1283 1386 IPR002710 -
Sto12g1478 1464 ProSiteProfiles IQ motif profile. 740 769 IPR000048 GO:0005515
Sto12g1478 1464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 719 817 IPR027417 -
Sto12g1478 1464 ProSiteProfiles Dilute domain profile. 1096 1407 IPR002710 -
Sto12g1478 1464 Gene3D - 373 557 - -
Sto12g1478 1464 Coils Coil 811 891 - -
Sto12g1478 1464 Gene3D Kinesin motor domain 1 596 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1478 Sto-Chr12 10153987 10167362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1478 1 1464 Myosins gene family AT5G20490 82.719 0.0 2518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1478 K10357 - gmx:100804820 2597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1478 12 10153987 10167362 Sto12g1478 12 10153987 10167362 ECH