Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1471 ATGAACAGAGGAAGCTTAGGCCCTAATCTCAAACTCACGCTTCCTGCATCTGATCAGGTTTCTTTCGCCAAATTCCTGACTGAAAGCGGGACGTTCAAGGATGGAGATCTGCTGGTCAACAAGTACGGCGTTCGAATCGTCTCCAAGAGTGAAGTCGAAGCTGCTCCACCCCCTATCAGGCCACTAGACAACCAGCTACGTTTAGAAGACATTGATGCTATCAAGGTGGTCGGAAAGGGAAGTAGCGGGATAGTGCAACTGGTGCAACATAAATGGACTAATCAATTTTTTGCACTAAAGGTGATTCAAATGAATATTGAGGAGTCTATACGCAAGCAGATAGCACAAGAGCTCAAAATTAATCAATCAGCTCAATGTCCTTATGTCGTTGTCTGCTACCAGTCCTCCTATGAAAATGGCATCATATCAATCATCTTAGAGTACATGGATGGGGGTTCTTTAGCAGATCTTCTCAAGAAAGTGATAACAATTCCAGAAGCATATCTTGCTGCCATCTGCAAGCAGGTGCTGAAGGGTTTAATGTATCTTCACCGTGAAAAACATATTATTCACAGGGACTTAAAACCTTCTAATTTGTTGATAAATCACAGAGGGGAAGTAAAGATCACTGACTTTGGTGTCAGTGCAATCTTGGAAAGTACATCTGGTCAAGCAAACACTTTCATTGGAACATGCATTTATATGTCTCCTGAGAGAATCAATGGATCCCAAGGCTATAACTACAAAAGTGATATATGGAGTTTGGGACTAATATTGCTTGAGTGTGCTACGGGAAGGTTTCCGTATAGACCGCCGGATCAAGGAGAAAGTTGGGAAAGTGTTTTCGAGCTTATTGAAGCTGTTGTCGAAAGTCCTCCACCCTGTGCTCCATCTGATCAATTTTCTCCAGAATTTTGCTCATTTATATCAGCATGTTTACAGAAAGATCCCAAGGGCAGATTTTCAGCTCAAGAACTCCTGAAACTTCCATTTATAAACATGTATGAGGACTTGGACGTGGATCTTTCAGATTACTTCTCCAATGCAGGATCTCCGCTCGCTACTTTATAA 1071 0.4211 MNRGSLGPNLKLTLPASDQVSFAKFLTESGTFKDGDLLVNKYGVRIVSKSEVEAAPPPIRPLDNQLRLEDIDAIKVVGKGSSGIVQLVQHKWTNQFFALKVIQMNIEESIRKQIAQELKINQSAQCPYVVVCYQSSYENGIISIILEYMDGGSLADLLKKVITIPEAYLAAICKQVLKGLMYLHREKHIIHRDLKPSNLLINHRGEVKITDFGVSAILESTSGQANTFIGTCIYMSPERINGSQGYNYKSDIWSLGLILLECATGRFPYRPPDQGESWESVFELIEAVVESPPPCAPSDQFSPEFCSFISACLQKDPKGRFSAQELLKLPFINMYEDLDVDLSDYFSNAGSPLATL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1471 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Sto12g1471 356 SUPERFAMILY Protein kinase-like (PK-like) 68 337 IPR011009 -
Sto12g1471 356 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 356 - -
Sto12g1471 356 Pfam Protein kinase domain 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1471 356 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Sto12g1471 356 ProSiteProfiles Protein kinase domain profile. 71 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1471 356 CDD PKc_MAPKK_plant_like 69 336 - -
Sto12g1471 356 SMART serkin_6 71 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1471 356 PANTHER MAP KINASE KINASE 1 356 - -
Sto12g1471 356 Gene3D Transferase(Phosphotransferase) domain 1 151 352 - -
Sto12g1471 356 Gene3D Phosphorylase Kinase; domain 1 51 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1471 Sto-Chr12 10083692 10087342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1471 27 355 MAP Kinase Kinase Gene Family AT4G26070 69.277 8.43e-169 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Sto12g1471 Pkinase 6.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1471 K20603 - gmx:547701 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1471 12 10083692 10087342 Sto12g1471 12 10083692 10087342 ECH