Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1470 ATGGAGGAAATATCTTCAACAATTGCAGTGCCATCATTTACACTTGGGAAATTGAAGCTTATGGCTAATACAGCAGCTTTGATATTGAATCCTTCTGCAATGGAGGATTGtgagcatcatcatcatcatcatcagattACTGTATGTGATGCAGAGAAGAAGGAAAATCAGGTTGTTTCTGATATGAGTATGGTCATTAGGTGTGAAGGAAACTGGGTTTGGAATGAAACCCATAATAATAATCAGATCAAAAgcaaggaagaagatgatgatggtgatgatttCATGCTGGAGGTTGCTTTTCAATCTTCAACCATGAAGACTAATTGTTCTGAGATTGATACAACAAATACCATCAAACTTGAAGATGATACGACACTAAACCCAGTGCAGAAAATGGTTTCAGTGATGTCCGAAGTGCATGAAGTATACGATTTAGACCATCGAATGAAAGTGTTGCAGTGCTGCagacacgaatctcaattttcatcTGACGGTTCAAATTTTGCAATTCAGAGGAGAAGCAAGCCCCTTTGGGGGTTTTCATCAATATGTGGAATGAGACAAGAGATGGAAGATGCTGTTGCTATTGAGCCTCAACTCTTGCAAGTgaatcaaaactcaaaatactCTCAAGAAGCACAGTTTTTTGGTGTCTATGATGGACATGGAGGCTCTCAGGTTGCTAATTACTGCCGGAAGCGCCTTCATTCCGCGTTAATCGAAGAAATTGAAGCTGCAGAATCAATTTTGGGTGAAAATAATAATGCAGGAGAAAAATGGGAGGATCATTGGAAGATAGTATTCTGCAATTGTTTCCAGAAAGTGGATGATGAAGTTATAGGAAAATGTGAAGCTAATAATAGTGAAAGCAACATTAATGGATCAGAATGTAGTATTGAAGCTCTTGAAACTATTGGATCTACTGCTGTGGTTGCCATTTTAAGCCAAACTCACATAATAGTTGCAAATTGTGGGGATTCAAGAGCAGTCTTGTACCGTGGGAAAGAAGCCATTCCATTGTCTAATGATCATAAACCAAATAGGGAGGATGAGTGGACAAGAATAGAGGCTGCAGGAGGAAGGGTCATACATTGGAATGGATACAGAGTCCTTGGTGTTTTGGCAGTATCAAGGTCCATAGGTGACAAATACTTGAAACCATGGATAATTCCAGAACCAGAAGTGAAGTTtgtggtgagagagaaaaatGATGAGTGCCTTATTCTGGCCAGTGATGGTTTATGGGATGTAATGACCAATGAGGAAGCATGCCAAGCTGCAAGAAACAGAATCCTTGTTTGGCACAAGAAATATGGTAATAATGGAAACGCAAGAAaatatgaagaagaagaagatgaaggagtTGATCCTGCAGCTCAATATGCTGCAGAATATCTTTCACAACTTGCCCTCCAAAGGGGAAGTAAAGATAATGTCTCAGTTATTGTGTGCAAATTCTGTGAAGTGTTGAAGTGCGGGTGA 1485 0.3609 MEEISSTIAVPSFTLGKLKLMANTAALILNPSAMEDCEHHHHHHQITVCDAEKKENQVVSDMSMVIRCEGNWVWNETHNNNQIKSKEEDDDGDDFMLEVAFQSSTMKTNCSEIDTTNTIKLEDDTTLNPVQKMVSVMSEVHEVYDLDHRMKVLQCCRHESQFSSDGSNFAIQRRSKPLWGFSSICGMRQEMEDAVAIEPQLLQVNQNSKYSQEAQFFGVYDGHGGSQVANYCRKRLHSALIEEIEAAESILGENNNAGEKWEDHWKIVFCNCFQKVDDEVIGKCEANNSESNINGSECSIEALETIGSTAVVAILSQTHIIVANCGDSRAVLYRGKEAIPLSNDHKPNREDEWTRIEAAGGRVIHWNGYRVLGVLAVSRSIGDKYLKPWIIPEPEVKFVVREKNDECLILASDGLWDVMTNEEACQAARNRILVWHKKYGNNGNARKYEEEEDEGVDPAAQYAAEYLSQLALQRGSKDNVSVIVCKFCEVLKCG 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1470 494 Pfam Protein phosphatase 2C 180 480 IPR001932 -
Sto12g1470 494 PANTHER ALPHABET, ISOFORM E-RELATED 172 485 - -
Sto12g1470 494 SUPERFAMILY PP2C-like 176 487 IPR036457 -
Sto12g1470 494 ProSiteProfiles PPM-type phosphatase domain profile. 178 487 IPR001932 -
Sto12g1470 494 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 172 485 - -
Sto12g1470 494 SMART PP2C_4 168 485 IPR001932 -
Sto12g1470 494 Gene3D - 167 490 IPR036457 -
Sto12g1470 494 CDD PP2Cc 180 484 IPR001932 -
Sto12g1470 494 ProSitePatterns PPM-type phosphatase domain signature. 216 224 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1470 Sto-Chr12 10076942 10081543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1470 174 484 PP2C-type Phosphatase Gene Family AT4G26080 58.491 1.42e-121 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1470 K14497 - gmx:100802159 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1021 3 7026316 7028753 Sto12g1470 12 10076942 10081543 CCT
Sto12g1470 12 10076942 10081543 Sto12g1470 12 10076942 10081543 ECH