LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto12g1468	ATGGAGAGGGTAGCTGCCGCCAAGAAATTCATTGAGAATCATTACAGAGCTCAAATGAAGCACATTCGAGATCGCAAGGAGAGGCGCTCAGTGCTGGAACAAAAGTTTGCATCTTCTCATGTTCCAGAAGAGGAACAGATCAATCAACTGAAAGATTTAGAGCGCAAGGAGACTGAGTATATGCGATTAAAAAGACATAAAATATGTGTGGATGATTTTGACCTTCTAGCCATTATTGGGAGGGGAGCCTTCGGAGAGGTAAGACTTTGTCGCGAGAAGAAATCAGGCAATATTTATGCCATGAAAAAGTTGAAAAAGTCTGAAATGCTCAGCAGGGGGCAGGTTGAACATGTTAGAGCTGAGAGAAACTTACTTGCAGAAGTTGCCAGTCACTGCATTGTGAAACTCTATTACTCCTTTCAGGATGCTGACTTCTTGTATCTGATAATGGAATACTTACCTGGTGGGGATATAATGACATTGCTGATTAGAGAAGAAACTTTAACTGAAACTGTGGCTAGATTTTACATTGCTCAAAGTGTTTTGGCCATAGAGTCTATTCATAAACACAATTACATTCACCGAGATATAAAACCTGACAATCTTCTATTGGATATAAATGGTCATATGAAGCTGTCTGATTTTGGTCTTTGCAAGCCACTTGACTGCACAAATTTATCATCaataaatgaaaatgaagttCTAGATGATGATAACTTGCATGACACAATGGACATTGATGGATCCTTACCAAATTGCAAATCCGGAAGGCCCTGGAAAAGTCCCCTTGAACAACTTCAGCATTGGCAAATAAACAGGAGGAAGCTGGCATTTTCGACAGTTGGAACTCCAGACTATATTGCTCCTGAAGTGTTGCTGAAAAAGGGATACGGTGTGGAATGTGACTGGTGGTCTCTTGGTGCTATAATGTATGAGATGCTTGTTGGTTATCCCCCGTTCTACTCTGATGATCCAGTAACAACATGCAGAAAGATTGTACATTGGAAAAATCACTTAAAATTTCCAGAAGAGGCAAGGTTGACGCCTGAGGCAAAGAATCTAATTTGTAGGTTGCTCTGTGATGTTGACCATAGGCTTGGTACCAGAGGCGCAGATGAAATTAAAGCTCATCCTTGGTTCAAAGATGTTGCATGGGATAAGCTGTATGAAATGGAAGCAGCATTCAAACCACAAGTGAATGGAGAACTTGACACtcaaaattttatgaaatttgatgagGTTGATACACCAAAACCGGCTAGAACTGGATCTGGTCCCATGAGGAAGATGCTATTGACTTCTCAAGATCTTAGCTTTGTTGGTTATACATATAAGAATTTTGATGCTGTCAAGGGCATGCACCGTTCTATGGATCCGATGGGAGGAAGCATGTCATCGCCAATGACAATATCTGGCCATGACTCCCCACAAAgtgATTCTGGAATAGACTATTCTTCTGGATTCTCCATGGACAGATCATATCCTTAG	1488	0.4012	MERVAAAKKFIENHYRAQMKHIRDRKERRSVLEQKFASSHVPEEEQINQLKDLERKETEYMRLKRHKICVDDFDLLAIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDADFLYLIMEYLPGGDIMTLLIREETLTETVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDINGHMKLSDFGLCKPLDCTNLSSINENEVLDDDNLHDTMDIDGSLPNCKSGRPWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKNLICRLLCDVDHRLGTRGADEIKAHPWFKDVAWDKLYEMEAAFKPQVNGELDTQNFMKFDEVDTPKPARTGSGPMRKMLLTSQDLSFVGYTYKNFDAVKGMHRSMDPMGGSMSSPMTISGHDSPQSDSGIDYSSGFSMDRSYP	495

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto12g1468	495	MobiDBLite	consensus disorder prediction	459	495	-	-
	Sto12g1468	495	PANTHER	SERINE/THREONINE-PROTEIN KINASE	1	490	-	-
	Sto12g1468	495	CDD	STKc_NDR_like	71	445	-	-
	Sto12g1468	495	ProSitePatterns	Protein kinases ATP-binding region signature.	79	102	IPR017441	GO:0005524
	Sto12g1468	495	SMART	pkinase_C_6	381	446	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
	Sto12g1468	495	Gene3D	Transferase(Phosphotransferase) domain 1	159	397	-	-
	Sto12g1468	495	ProSiteProfiles	Protein kinase domain profile.	73	380	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto12g1468	495	ProSiteProfiles	AGC-kinase C-terminal domain profile.	381	454	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
	Sto12g1468	495	Pfam	Protein kinase domain	273	380	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto12g1468	495	Pfam	Protein kinase domain	76	222	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto12g1468	495	SMART	serkin_6	73	380	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto12g1468	495	PANTHER	NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE	1	490	-	-
	Sto12g1468	495	Gene3D	Phosphorylase Kinase; domain 1	63	158	-	-
	Sto12g1468	495	MobiDBLite	consensus disorder prediction	462	495	-	-
	Sto12g1468	495	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	192	204	IPR008271	GO:0004672\|GO:0006468
	Sto12g1468	495	Pfam	Protein kinase C terminal domain	399	444	IPR017892	GO:0004674\|GO:0005524\|GO:0006468
	Sto12g1468	495	SUPERFAMILY	Protein kinase-like (PK-like)	70	442	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto12g1468	Sto-Chr12	10039303	10043025	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto12g1468	1	467	AGC Kinase Gene Family	AT2G19400	78.038	0.0	772

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_NDR	Sto12g1468		Pkinase	8e-42	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto12g1468	K08790		-	twl:120006492	848.195

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto12g1468	12	10039303	10043025	Sto12g1468	12	10039303	10043025	ECH