Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1465 ATGAGATCAGTCGCCGTAGCCGTCAACGGTGGTTCCGGCGCCGGCAAGGGAAGCCGGCGAGCCGTCCAGTGGGCGGTGCAGAATCTCATGCCTCAAGCCGATAGGTTCATCTTAGTTCACGTCATTCCGATAATCACTTCAATTCCAACTCCATCTGGAGAGTGTATTCCCATTACGAATGTAGATGCCAAAATTGCAGAAGCTTATGTTCAGGATGTGAAAGAAATGTTCGAGCATGTCTTCATCCCGTTCAAGAAGCTCTGCAAAACAAGCACAGTGGAAACTTTGTTGCTAGAAGATGACAATCCTGCAACTGCACTTATTAGATATATATCAGAGTCGGACATTCAAATATTAGTGATGGGAACTTCCTCCGAAAATTTTATAACAAGGAAGCTGAAAGGACCAGGGATACCATCAACTGTTGTAAAATGTGCTCCCAAcaattgtgatgtatatattgtAGCCAGAGATAGAACAATATCAAAATTATCGGATTCTTCATCTTCGCCCTCTTGTGAGACTAGCGCTAGGTACTCAATGCCTACCCAAGGGAATAAAGAAGACAGTGATGCTGGCATTGATAGAGAAATTTCTGGACTTGGTTCTTCCTCAACAGAACATAATTTTTTCCAAAACTTTCCATCAATGTCAGAATGGAGTTATATGGGTTTTCAAACATCTAGTCCTATAAATTCTCTTAAAAATTCCACCATAAATCAAGGAGGAAATCCAGAGAGTTCTAGAGATGATGCTGACACTGTTAGTATCCACTCATTTGATTCCCTGGCTTCTGCGCAGTTTGAACAGCCAATCATGCAAGAAGTAGAGCAGCTGCAGCTGGAGTTGCAGAATACAATTGCCATGTACAAGCAAGTTTGTGAAGAGTTGGCTCATGCTCAAAGCAAGACCCGTTTAGTTTCATCTGAATGTCTTGAAGAAACAAGAAGAGTAGATGCTTCCCTGAAAAGAGAGGAGATGCTAAGAAAAATTGCTGCtgtagaaaaagaaaagcatTTAAAAGTCATGAAGGAACTTGAGGAGGCAAAAAATATGTTTGCAAAAGAGTCTTATGAAAGGCAGATGGCTGAACTTAATGTTGCTAAAGAATCCCTTGAAAGAAAGAGAATACTTAATACTTTGCTCTCAAGTGACAGGAGATACAGAAAATACACTATGGATGAAATTGAAGAAGCAACAAACTTCTTCTCCGACGATTTTGTAATTGGTGAAGGAGGGTATGGGAAGGTTTACAAGTGCAGTCTTGATCACACATCAGTAGCTGTAAAGGTTCTGAATCAGGATGCAATTAACAAGAAAGAGGAGTTTCTAAAAGAGGTTGAGATTCTTAGTCAGCTACACCATCCACACATGGTTTTGCTACTAGGAGCCTGTCCTGAAACTGGTTGCCTTGTTTATGAATACCTAGATAATGGAAGTCTAGAGGACTACCTTTTCAAAAAAGGGAAACCACCACTTCCTTGGTTCATTCGATTCCGTATAGCTTTTGAAGTGGCATGTGGTTTATCATTCTTGCATAATTCAAAGCCAGAGCCGATTGTTCATCGAGATATGAAACCCGGAAATATCTTGTTAGACAGAAATTATGTGAGCAAAATTGCAGATGTTGGGTTGGCTAAATTCCTTTCAGACGTCGTGCCTGACAATGTCACCGAGTACAGAGAATCTGTGCTTGCTGGTACTATGCACTACATGGATCCAGAGTATCAGAGAACAGGCACCATCCGACCAAAATCAGATATATATGCTTTGGGAGTTATAACTCTTCAATTGATAACTGCTCGCCACGCACGTGGACTCCTTTTGGCTGTTGAAAATGCAGTTACAACTGGCTCCTTCCCTGACATTTTAGATAAATCAGCTGGAGATTGGCCACTTGCTGAGACAGCCGAGTTAATTCAAATGGCTCTAAAATGCTCAGCACTTAGATGCAGAGATAGACCAGATCTTGATACTGAAATTCTTCCACTATTCAAAAGACTTTTTGATTTTGCAAATGCTTCTGCGAAGATGGGAAGAAATAGCACATGCCCACCAGGCCAGTTTTACTGCCCAATCCTTCAGGAAATAATGGATGATCCACACATTGCTGCCGATGGTTTTACTTATGAGTACAGAGCAATCAAGGCATGGCTCAACAAACACAACGTATCGCCTGTGACGAAGGTTAGGCTTCAGCGTTCTACATTGATTCCGAACCATACCCTACGTTCTGCCATTCGGGAATGGAGGTCGGGAAGAGAGTGA 2268 0.4127 MRSVAVAVNGGSGAGKGSRRAVQWAVQNLMPQADRFILVHVIPIITSIPTPSGECIPITNVDAKIAEAYVQDVKEMFEHVFIPFKKLCKTSTVETLLLEDDNPATALIRYISESDIQILVMGTSSENFITRKLKGPGIPSTVVKCAPNNCDVYIVARDRTISKLSDSSSSPSCETSARYSMPTQGNKEDSDAGIDREISGLGSSSTEHNFFQNFPSMSEWSYMGFQTSSPINSLKNSTINQGGNPESSRDDADTVSIHSFDSLASAQFEQPIMQEVEQLQLELQNTIAMYKQVCEELAHAQSKTRLVSSECLEETRRVDASLKREEMLRKIAAVEKEKHLKVMKELEEAKNMFAKESYERQMAELNVAKESLERKRILNTLLSSDRRYRKYTMDEIEEATNFFSDDFVIGEGGYGKVYKCSLDHTSVAVKVLNQDAINKKEEFLKEVEILSQLHHPHMVLLLGACPETGCLVYEYLDNGSLEDYLFKKGKPPLPWFIRFRIAFEVACGLSFLHNSKPEPIVHRDMKPGNILLDRNYVSKIADVGLAKFLSDVVPDNVTEYRESVLAGTMHYMDPEYQRTGTIRPKSDIYALGVITLQLITARHARGLLLAVENAVTTGSFPDILDKSAGDWPLAETAELIQMALKCSALRCRDRPDLDTEILPLFKRLFDFANASAKMGRNSTCPPGQFYCPILQEIMDDPHIAADGFTYEYRAIKAWLNKHNVSPVTKVRLQRSTLIPNHTLRSAIREWRSGRE 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1465 755 CDD RING-Ubox_WDSUB1_like 689 729 - -
Sto12g1465 755 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 156 - -
Sto12g1465 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Sto12g1465 755 Gene3D HUPs 1 163 IPR014729 -
Sto12g1465 755 Coils Coil 433 453 - -
Sto12g1465 755 CDD STK_N 3 157 - -
Sto12g1465 755 MobiDBLite consensus disorder prediction 164 199 - -
Sto12g1465 755 SMART Ubox_2 688 750 IPR003613 GO:0004842|GO:0016567
Sto12g1465 755 Gene3D Phosphorylase Kinase; domain 1 382 475 - -
Sto12g1465 755 MobiDBLite consensus disorder prediction 234 250 - -
Sto12g1465 755 SMART serkin_6 403 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1465 755 ProSiteProfiles Protein kinase domain profile. 403 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1465 755 SUPERFAMILY Protein kinase-like (PK-like) 385 658 IPR011009 -
Sto12g1465 755 Pfam U-box domain 686 752 IPR003613 GO:0004842|GO:0016567
Sto12g1465 755 MobiDBLite consensus disorder prediction 234 253 - -
Sto12g1465 755 Coils Coil 355 375 - -
Sto12g1465 755 ProSitePatterns Protein kinases ATP-binding region signature. 409 430 IPR017441 GO:0005524
Sto12g1465 755 ProSiteProfiles U-box domain profile. 684 755 IPR003613 GO:0004842|GO:0016567
Sto12g1465 755 Coils Coil 317 337 - -
Sto12g1465 755 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 685 755 IPR013083 -
Sto12g1465 755 Coils Coil 276 296 - -
Sto12g1465 755 SUPERFAMILY RING/U-box 684 751 - -
Sto12g1465 755 Gene3D Transferase(Phosphotransferase) domain 1 476 676 - -
Sto12g1465 755 PANTHER OS02G0152300 PROTEIN 3 752 - -
Sto12g1465 755 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34 3 752 - -
Sto12g1465 755 Pfam Protein tyrosine and serine/threonine kinase 408 657 IPR001245 GO:0004672|GO:0006468
Sto12g1465 755 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1465 Sto-Chr12 10010901 10015449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1465 3 752 Plant U-box Gene Family AT5G57035 53.956 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Sto12g1465 PK_Tyr_Ser-Thr 3.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1465 - - gmx:100805896 1070.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1465 12 10010901 10015449 Sto12g1465 12 10010901 10015449 ECH