Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1460 ATGTTGTTGAATGGCGGTGGTGGGAGATGCTTGATTCTGGTAGTAGTGTTGATGCTAACTACGAATACCAATGGGAACACAAGTCACAACCATTATTGCAGCAACACATCCTGCGGCTCTGATGCCAATGGAGGTTCTctcattcaatttcaattccccTTCCAACTTATTGAAGATAATGCTTTTTGTGGGTATCCCGGCTTCGCCCTATCTTGCACAAACCACACCACAATACTTCATTTCCCTTCAAATCCTTCTCTCACGGGAATAACACTCTCAGTCGGAAACATAGACTACGAATCCCGACAGTTATACGCATCGGACCCACGAGGCTGCCTTCCCGGACTCTTCCTCCGACTTCTCCACAATTCATCGATCTATCCCTTCCGATTCGATACGTCTTATTATCAATTGTTGGAGGATACCAAAACCCCCAAAAATGTCACGTTCTTCGATTGCTCTTCGGTGGAGTCGAGGTACCTCACGAGTGGACACAGTTTGTATCGTGAACGACAAGATATGTTTGCTTGTCCTGTTTATGCTGCTGGGTCGGAGGAGAGTGTGGTGGAGTTGAGCTTAGTGTCGTGCACTAAGGTATTAGAGATCGTTTCTCTGGTAAGAGCTGAAGACCTTCGGAGGAATACATTACGACTCACATGGTCCAAACCTAAATGTGATGATCACAATTTTTATTGCAACCACAAACCAAGCAAAACTACCATTCTTTTACCTACCACAGGTTCAATTGTGCTGGTGCTTCTACTCATTGCGTTCTTCAAAATATATCGCTTCTTCAAAATGAAAGGAGACGACCAGGCAAGGCTCGAAAATTTTTTGGAGGATTACACAGCACTTCGACCTACAAGATTCTCTTATTCTGATCTCAGAAGAATTACAAACCATTTTAAGGATAAATTAGGCGAAGGAGCTCATGGGGCAGTCTTCAAAGGCAAATTATCTACTCATATCCCAGTTGCTATAAAAGTGCTCAACAATTCAGATCAAGAAGATGGCAGAGACTTCATCAACGAAGTGGGAACAATGGGAACAATTCATCACATCAACGTAGTTCGTTTGTTGGGTTTCTGTGCCGATGGCTTCCACCGTGCTCTTGTTTACGATTTTTACCCAAACGGGTCGTTACAGAACTTCCTATCTTCCCCGGACGATAAGGAAAATTTCCTTGGATGGTCCAAGTTGCATCAAATTGCTCTTGGCGTAGCCAAAGGGATTGAGTATCTTCATCAAGGTTGTGATCATCGGATTCTTCACTTCGACATCAATCCTCGTAACGTGTTATTAGATCACAATCTCGCTCCCAAGATTACCGATTTTGGGTTGGCCAAATTGTGCTCTAAGAATCAAAGTACGGTTTCAATGACCGCAGCAAGAGGAACTTTAGGGTACATTGCGCCCGAAGTTTTCTCTAGAAATTTCGGGAATGTGTCGTATAAATCGGATATTTACAGTTATGGTATGTTGCTCTTAGAAATGGTTGGGGGGAGAAAAAATACAAGCGCAACCCAAGACACCTTCCAAGTTCTGTATCCAGAATGGATCCATAATTTGATTGAAGGGAGAGACATAAATATCAAtatagaagatgaagatgacatTAAAATTGCAAAGAAACTTGCAATTGTGGGACTTTGGTGCATTCAGTGGCATCCAATGAATCGTCCATCCATAATAAGAGTTTTACAAATgcttgaaggagaagaagataaATTGAAGGTGCCTCCTAACCATTTTGACTCAAATGCTTCTACTAGTACAAGTGTTAATATTCCCACTAGAAGGATGAATTTGGAGCTGGAAGTGATTCGTGAATTAGAATAA 1839 0.4095 MLLNGGGGRCLILVVVLMLTTNTNGNTSHNHYCSNTSCGSDANGGSLIQFQFPFQLIEDNAFCGYPGFALSCTNHTTILHFPSNPSLTGITLSVGNIDYESRQLYASDPRGCLPGLFLRLLHNSSIYPFRFDTSYYQLLEDTKTPKNVTFFDCSSVESRYLTSGHSLYRERQDMFACPVYAAGSEESVVELSLVSCTKVLEIVSLVRAEDLRRNTLRLTWSKPKCDDHNFYCNHKPSKTTILLPTTGSIVLVLLLIAFFKIYRFFKMKGDDQARLENFLEDYTALRPTRFSYSDLRRITNHFKDKLGEGAHGAVFKGKLSTHIPVAIKVLNNSDQEDGRDFINEVGTMGTIHHINVVRLLGFCADGFHRALVYDFYPNGSLQNFLSSPDDKENFLGWSKLHQIALGVAKGIEYLHQGCDHRILHFDINPRNVLLDHNLAPKITDFGLAKLCSKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTSATQDTFQVLYPEWIHNLIEGRDININIEDEDDIKIAKKLAIVGLWCIQWHPMNRPSIIRVLQMLEGEEDKLKVPPNHFDSNASTSTSVNIPTRRMNLELEVIRELE 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1460 612 Pfam Protein kinase domain 302 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1460 612 SUPERFAMILY Protein kinase-like (PK-like) 282 571 IPR011009 -
Sto12g1460 612 PANTHER RUST RESISTANCE KINASE LR10-RELATED 32 610 IPR045874 GO:0004672
Sto12g1460 612 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Sto12g1460 612 Gene3D Phosphorylase Kinase; domain 1 276 375 - -
Sto12g1460 612 PANTHER RECEPTOR-LIKE KINASE 32 610 - -
Sto12g1460 612 ProSiteProfiles Protein kinase domain profile. 300 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1460 612 Pfam Wall-associated receptor kinase galacturonan-binding 33 107 IPR025287 GO:0030247
Sto12g1460 612 Gene3D Transferase(Phosphotransferase) domain 1 376 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1460 Sto-Chr12 9973925 9976536 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1460 266 592 Receptor kinase-like Gene Family AT1G66910 48.060 1.11e-101 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto12g1460 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1460 - - adu:110273083 621.698