Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1459 ATGAGGAAAGGAAAAGGCTTATGGTGGAGCTTGTGTCAAATTCTAGTGTTGCTTACTCTGCTATACGGAGTTAGTTGTAAAGCAGAAGCTAACTGTGTGGCGTCTCGCTGCGGCGTCATCGCCAACATATCCCATCCCTTTCGACTCCGAAACGACCCCTCACAATGTGGTGAATCCAGGTTCGAATTAACCTGCAAGGACAATACAACTTTGCTTCTTCCTTTGTACTCCGGGACATACCGCGTCCTCGGAATCAACTACGACAACTTCACCGTCCGCCTCATCGACACCGGAATTCAACCACGCAACATCTCCTCCCTCCCTCGCTATTTCCTATCTCGATCCAATTTCAGCGACTCCTACGATTCCGAAATCGGTAGCGACGACATAGATCCCTATGGTCCCACTCAATATCCCGATGAGGCTGTATTCCGGCATGTAATATACTTGAACTGTAGCGATCCGGTGAGGGACGATGCACGGTATGTGGATACGTCTCCCTATGGCCTCAATTGGGACGAAAGAGGGGATTCTAGTAAGGGATTTGTTTATGCTGTGGTTGGAGACTTGGCGGTTAAGGACTTGAAACCGCAGTGTCGTTTGAAGTTCGTCGCTACGGCTTCCTCTTCCTGGCTGGGATCTGGTGATGAACGACATGGAGCGTCGTTGTCGTATGGTGATATTCACGAAGCGATGTCGTTTGGATTTGAGGTTTCGTGGTGGAAACGCGCGTGTGTGGATCATCCTTGTCCTTTTCAAATTGCCTGTGTGTATAACTCTGACGCAGGATCACTCCAATGCTTGGTAGATGAACCTAGCTGTTTATCTCCAATGGGAATAAATGATGAATGGGATTGTGGACGATATATGCCAAAGCTGCGCATATTTGCAGAAGATTATATCTATGGGATTTATAAAGGACTGCATCAAATATTAGGAGAGGGTACTTACGATCACTATACTGACTACGATTTTAGTCTAACACAGTTTGCAATCAACTTAGGAGTAGTCACCGGAAGATTTATTATACCATACATGATGGTTAGAGTTCCATTTGGTTTTATATTTCTCGCTGCTCTATTAATTTATACATGTCGAAGAAGACACTTATCAGTTTATGAAAATATCGAAGACTTCTTGCAACTTCATAACCTCATTCCAATAAGGTATTCCTACAAGGAATTAAAGACAATGACCAAAGGTTTCAAGAACAAGTTAGGTCAAGGGGGTTTTGGCAAAGTATACAAAGGGAAGCTAAGTAGTGGACTTGATGTAGCTATCAAAATGTTGGGTAAATCCGAAGCTAATGGCCAAGATTTCATAAGTGAAGTCGCAACTATTGGGAGGATACATCATTTCAATGTGGTAAGATTTGTTGGGTTCTGTGTGGAAGGAAGAAAACGTGCTCTTGTTTATGAATTCATGCCTAATGGATCTTtggataaatatattttctctaaAGAAGGAAGTGTCCCTTTAAGTTATGAGAAAATATATGAGATATCTCTGGGAGTGGCTCGTGGGATTGCTTATCTTCATCATGGTTGTGATATGCAAATATTGCATTTTGATATCAAGCCTCACAATATTCTTCTGGATGAAAATTTTACTCCGAAAGTTTCGGATTTCGGACTCGCAAGATTGTATCCTATTGATGATAGTATTGTCACTATGACTGCAGCAAGAGGAACAATAGGGTACATGGCTCCTGAATTGTTCTACAAGAATATTGGGGGAGTGTCCTATAAGGCTGATGTGTATAGTTTTGGGATGCTTTTGATGGAAATGGCAGGCAGGAGGAGGAACTTGAATCCGCATGCTGAGGATTCAAGTCAGCTTTACTTTCCTCTTTGGGTTTACGACCAATTCAATGAAGAGAAAGATATAGAAATTGAAGATTTGACCAAAGAGGAGAAGGATTTAGCAAGAAAAATGTTTATAGTAGCACTGTGGTGTATTCAAATGAAGCCTATTGATCGTCCCTCAATGAAGAGAGTAGTAGAAATGTTAGAAGCAGATGATGTTGAAAGCCTTGAGATGCCTCCAAAGCCTTCACTCTATCCTAATGAAATAGTTGCGGTGGATAATGGATCAAGCTTGAACCAAACAACTACTTCCTCTGACATCATGCATTCATCCAATAATCTGGGAGAGTTTACTGATGATTATGAAGAATAA 2178 0.4164 MRKGKGLWWSLCQILVLLTLLYGVSCKAEANCVASRCGVIANISHPFRLRNDPSQCGESRFELTCKDNTTLLLPLYSGTYRVLGINYDNFTVRLIDTGIQPRNISSLPRYFLSRSNFSDSYDSEIGSDDIDPYGPTQYPDEAVFRHVIYLNCSDPVRDDARYVDTSPYGLNWDERGDSSKGFVYAVVGDLAVKDLKPQCRLKFVATASSSWLGSGDERHGASLSYGDIHEAMSFGFEVSWWKRACVDHPCPFQIACVYNSDAGSLQCLVDEPSCLSPMGINDEWDCGRYMPKLRIFAEDYIYGIYKGLHQILGEGTYDHYTDYDFSLTQFAINLGVVTGRFIIPYMMVRVPFGFIFLAALLIYTCRRRHLSVYENIEDFLQLHNLIPIRYSYKELKTMTKGFKNKLGQGGFGKVYKGKLSSGLDVAIKMLGKSEANGQDFISEVATIGRIHHFNVVRFVGFCVEGRKRALVYEFMPNGSLDKYIFSKEGSVPLSYEKIYEISLGVARGIAYLHHGCDMQILHFDIKPHNILLDENFTPKVSDFGLARLYPIDDSIVTMTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMAGRRRNLNPHAEDSSQLYFPLWVYDQFNEEKDIEIEDLTKEEKDLARKMFIVALWCIQMKPIDRPSMKRVVEMLEADDVESLEMPPKPSLYPNEIVAVDNGSSLNQTTTSSDIMHSSNNLGEFTDDYEE 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1459 725 ProSitePatterns Protein kinases ATP-binding region signature. 406 428 IPR017441 GO:0005524
Sto12g1459 725 Gene3D Transferase(Phosphotransferase) domain 1 475 680 - -
Sto12g1459 725 ProSiteProfiles Protein kinase domain profile. 400 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1459 725 PANTHER RUST RESISTANCE KINASE LR10-RELATED 13 697 IPR045874 GO:0004672
Sto12g1459 725 MobiDBLite consensus disorder prediction 697 725 - -
Sto12g1459 725 Coils Coil 624 644 - -
Sto12g1459 725 Pfam Wall-associated receptor kinase galacturonan-binding 32 96 IPR025287 GO:0030247
Sto12g1459 725 Gene3D Phosphorylase Kinase; domain 1 375 474 - -
Sto12g1459 725 Pfam Protein tyrosine and serine/threonine kinase 402 670 IPR001245 GO:0004672|GO:0006468
Sto12g1459 725 MobiDBLite consensus disorder prediction 697 717 - -
Sto12g1459 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Sto12g1459 725 SUPERFAMILY Protein kinase-like (PK-like) 385 671 IPR011009 -
Sto12g1459 725 SMART serkin_6 400 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1459 725 CDD STKc_IRAK 406 671 - -
Sto12g1459 725 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 13 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1459 Sto-Chr12 9967047 9970390 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1459 374 705 Receptor kinase-like Gene Family AT5G38280 48.665 1.71e-105 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto12g1459 PK_Tyr_Ser-Thr 6.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1459 - - ahf:112697889 756.133