Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1457 ATGGCTCAAGTCACAAGAAATGACGAAAGTGTCCCCATCACGCGCACTCACATGCTGGTGTGCGAAGCTAATTGTGTGGCGTCTCGCTGCGGCGTCATAACCAACATATCCCATCCCTTTCGACTCCAAAACGACCCCTCAGAATGCGGCGATCCAAGTGATCCGGTGAGGGACGATGCACGATATGTGGATACGGCTCCCTACAACCTCACTTGGGACTCCAACAAAGGGAATATTAAAGGATATGTTTATGCTGTGGCTGGTGGAAACTTTGAGGTTAAGGACTTCAAACCGCAGTGTCGTTTGAAGTTCGTCGCTACGGCTTCCTCTTCCTGGCTGGGATCTGGTGCGTCGTTGTTGTCGTATGCTGATATTCACGAAGCGATGTCGTTTGGATTTGAGGTTTCGTGGATGAAACAAGCTTGTGTGGATCATCTATGTCCTACTCAGAGCTGCGTGTATGACTTTTACGCAGAAGCACTCCAATGCTATACACCTTACTGTTTGACTCCAATTGGATTAACTGGGACGGATTGTGGATATATGCCAAAGCTGCGCATATTTGCAGAAGATTATATCTATGGGATTTATAAAGGACTACATAAAATATTAGGAGAGGGTACATACGATCACTACAATAACTACGATTTTAATCTAACTCAGCTTGCAATCAACTTGGGAGTAGTCACCGGAAGATTTATTATACCATACATGATGGCTAGAGTTTCACTtggtattatatttttgtctgctCTATTGATTTATACATGTCGAAGAAGACACTTATCAGTTTATGAAAATATTGAAGACTTCTTACAACTTCATAACCTCATTCCAATAAGGTATTCCTACAAGGAATTAAAGACAATGACCAAAGGTTTCAAAAACAAGTTGGGTGAGGGAGGTTTCGGCACTGTATACAAAGGGAAGCTCACTAGTGGGCCTGAAGTAGCCATTAAAATGTTGGGTAAATCCAAAGCTAATGGCCAAGAATTCATAAGTGAAGTGGCAACTATTGGGAGGATACACCATTTCAATGTGGTACGACTTGTTGGGTTTTGTGTGGAAGGAACAAAACGTGCTCTTGTCTATGAATTCATGCCCAATGGATCTCtggataaatatattttctctaaAGAAGGTAGCGTCCCCTTAAGTTATGAGAAAATGTATGAGATATCTCTGGGAGTGGCTCGTGGGATTGTTTATCTTCATCATGGTTGTGACATGCAAATATTGCATTTTGATATCAAGCCTCACAATATTCTTCTGGATGAAAATTTTGCTCCGAAAGTTTCGGATTTCGGACTCGCAAGATTGTATCCTATTGATGATAGTATTGTCACTATGACTGCAGCAAGAGGAACAATAGGGTACATGGCTCCTGAATTGTTCTACAAGAATATTGGGGGAGTGTCCTATAAGGCTGATGTGTATAGTTTTGGGATGCTTTTGATGGAAATGGCAGGCAGGAGGAGGAACTTGAATCCGCATGCTGAGGATTCAAGTCAGCTTTACTTTCCTCTTTGGGTTTACGACCAATTCAATGAAGAGAAAGATATAGAAATTGAAGATTTGACCAAAGAGGAGAAGGATTTAgcaagaaaaatgattatagtAGCACTGTGGTGTATTCAAATGAAGCCTATTGATCGTCCCTCAATGAAGAGAGTAGTAGAAATGTTAGAGGCAGATGATGTTGAAAGCCTTGAAATGCCTCCAAAGCCTTCTCTCTATCCTAATGAAACGATTGTAATGGATGATGGATCAAACTTTGACCAAACAACTACTTCCTCTGACGTCATGCATTCATCCAATAATCTGGGAGAGATTACTGATGATTATGAAGAATGA 1854 0.4035 MAQVTRNDESVPITRTHMLVCEANCVASRCGVITNISHPFRLQNDPSECGDPSDPVRDDARYVDTAPYNLTWDSNKGNIKGYVYAVAGGNFEVKDFKPQCRLKFVATASSSWLGSGASLLSYADIHEAMSFGFEVSWMKQACVDHLCPTQSCVYDFYAEALQCYTPYCLTPIGLTGTDCGYMPKLRIFAEDYIYGIYKGLHKILGEGTYDHYNNYDFNLTQLAINLGVVTGRFIIPYMMARVSLGIIFLSALLIYTCRRRHLSVYENIEDFLQLHNLIPIRYSYKELKTMTKGFKNKLGEGGFGTVYKGKLTSGPEVAIKMLGKSKANGQEFISEVATIGRIHHFNVVRLVGFCVEGTKRALVYEFMPNGSLDKYIFSKEGSVPLSYEKMYEISLGVARGIVYLHHGCDMQILHFDIKPHNILLDENFAPKVSDFGLARLYPIDDSIVTMTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMAGRRRNLNPHAEDSSQLYFPLWVYDQFNEEKDIEIEDLTKEEKDLARKMIIVALWCIQMKPIDRPSMKRVVEMLEADDVESLEMPPKPSLYPNETIVMDDGSNFDQTTTSSDVMHSSNNLGEITDDYEE 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1457 617 Gene3D Phosphorylase Kinase; domain 1 267 366 - -
Sto12g1457 617 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Sto12g1457 617 PANTHER RUST RESISTANCE KINASE LR10-RELATED 23 51 IPR045874 GO:0004672
Sto12g1457 617 PANTHER RUST RESISTANCE KINASE LR10-RELATED 53 592 IPR045874 GO:0004672
Sto12g1457 617 SMART serkin_6 292 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1457 617 SUPERFAMILY Protein kinase-like (PK-like) 277 563 IPR011009 -
Sto12g1457 617 Gene3D Transferase(Phosphotransferase) domain 1 367 572 - -
Sto12g1457 617 Coils Coil 516 536 - -
Sto12g1457 617 MobiDBLite consensus disorder prediction 587 617 - -
Sto12g1457 617 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 53 592 - -
Sto12g1457 617 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 23 51 - -
Sto12g1457 617 Pfam Protein kinase domain 295 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1457 617 ProSiteProfiles Protein kinase domain profile. 292 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1457 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Sto12g1457 617 MobiDBLite consensus disorder prediction 587 609 - -
Sto12g1457 617 CDD STKc_IRAK 298 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1457 Sto-Chr12 9952215 9961949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1457 266 603 Receptor kinase-like Gene Family AT5G38280 48.980 3.05e-109 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto12g1457 Pkinase 7.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1457 - - ahf:112697889 640.573