Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1456 ATGTTTGTTTGTCCTATTTATGCTGCTGACTCGTACGATAGTGTGGTTGATGAGTTGAGCGTAGTGTCGTCGTGCACTAAGATGTTGGACATCGATTCTCCCGTAAGTGCTGAAGAGCTTCGGATCAATAGATTACACTTCACATGGTTCAATCCTAATGGTGATGCTCATAATTTTTACTGCAACCACAAACCAAGCAAAACTACCATTCTTTTACCTACTATAGTGCTTCTACTCATTGCGTTCTTCAAAATATATCGTTACTTTAAAATGAAAGGAGACGACCAAGCAAGGCTCGAGAAATTCTTGGAGGATTACACAGCACTTCGACCTACAAGATTCTCTTACGCTGATCTCAAAAGAATTACGAACCGTTTTAAGGATAAATTAGGCGAAGGAGCTCATGGGGAAGTCTTCAAAGGCAAATTATCTACTCATATCCCAGTTGCTATAAAAGTGCTCAACAATTCAGATCAAGAAGATGGCAGAGACTTCATCAACGAAGTGGGAACAATGGGAACAATTCATCACATCAACGTGGTTCGTTTGTTGGGTTTCTGTGCTGATGGCTTCCACCGTGCTCTTGTTTACGATTTTTACCCAAATGGGTCGTTACAAAACTTCCTATCTTCCCCGGACGATAAGGAAAATTTCCTTGGATGGTCCAAGTTGCATCAAATTGCTCTTGGCGTGGCCAAAGGGATTGAGTATCTTCATCAAGGTTGTGATCATCGGATTCTTCACTTCGACATCAATCCTCGTAATGTGTTATTGGATCACAATCTCGCTCCCAAGATTACCGATTTTGGGTTGGCCAAATTGTGCTCTAAGAATCAAAGTACGGTTTCAATGACCGCAGCAAGAGGAACTTTAGGGTACATTGCGCCCGAAGTTTTCTCTAGAAATTTCGGGAATGTGTCGTATAAATCGGATATTTACAGTTATGGTATGTTGCTCTTAGAAATGGTTGGGGGGAGAAAAAATACAAGCGCAACCCAAGACACCTTCCAAGTTCTGTATCCAGAATGGATTCATAATTTGATTGAAGGGAGAGACATAAATATCAAtatagaagatgaagatgacatCAAAATTGCAAAGAAACTTGCAATTGTGGGACTTTGGTGCATTCAGTGGCATCCAATGAATCGTCCATCCATAATAAGAGTTTTACAAATgcttgaaggagaagaagataaATTGAAGGTGCCTCCTAACCATTTTGACTCAAATGCTTCTACTAGTACAAGTGTTAATATTCCCACTAGAAGGATGAATTTGGAGCTGGAAGTGATTCGTGAATTAGATTAA 1311 0.3905 MFVCPIYAADSYDSVVDELSVVSSCTKMLDIDSPVSAEELRINRLHFTWFNPNGDAHNFYCNHKPSKTTILLPTIVLLLIAFFKIYRYFKMKGDDQARLEKFLEDYTALRPTRFSYADLKRITNRFKDKLGEGAHGEVFKGKLSTHIPVAIKVLNNSDQEDGRDFINEVGTMGTIHHINVVRLLGFCADGFHRALVYDFYPNGSLQNFLSSPDDKENFLGWSKLHQIALGVAKGIEYLHQGCDHRILHFDINPRNVLLDHNLAPKITDFGLAKLCSKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTSATQDTFQVLYPEWIHNLIEGRDININIEDEDDIKIAKKLAIVGLWCIQWHPMNRPSIIRVLQMLEGEEDKLKVPPNHFDSNASTSTSVNIPTRRMNLELEVIRELD 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1456 436 Gene3D Phosphorylase Kinase; domain 1 99 199 - -
Sto12g1456 436 Pfam Protein kinase domain 127 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1456 436 ProSitePatterns Protein kinases ATP-binding region signature. 130 152 IPR017441 GO:0005524
Sto12g1456 436 Gene3D Transferase(Phosphotransferase) domain 1 200 415 - -
Sto12g1456 436 SUPERFAMILY Protein kinase-like (PK-like) 106 395 IPR011009 -
Sto12g1456 436 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 435 IPR045874 GO:0004672
Sto12g1456 436 ProSiteProfiles Protein kinase domain profile. 124 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1456 436 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1456 Sto-Chr12 9941234 9943301 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1456 90 416 Receptor kinase-like Gene Family AT1G66910 48.060 3.94e-103 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto12g1456 Pkinase 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1456 - - adu:110273083 571.237