Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1455 ATGGAAAGAGGTAAAGGCTTAATCCCAAGGTTATGGTGGTGCTTATTCTCGTTTACTCTACAAATCCTTCTCACGAACTGTGAAGCCAAATCTTGCGCTCCATCTCGATGCGGCACAATCACCGACATCCACCATCCCTTCCGGCTACCACAAGATCCACCACATTGCGGCGACGAGAGATACGAATTAGCCTGCGAAAACAACGACACCACCACCACACTTTCTCTCTACTCCGGGAAATACCGCGTCCTCGCAATCAACTACAACAACTTCACAATCCGCCTCGTCGATCCAGGAATCCAGCGCGGTAACTGCTCCTCCCTCCCTCGCTACTTCTTATCCCAATCCAACTTCAGCGACACCTTCAATTACTCCTACGGATACGACGCCGATCCGTTTCGCGCCACTCAGACGTCGGTTCAATCGGAGACGATCTTCGAGCACGTCGTGTACTTGAACTGCAGCGATCCGGTGACGGTGAGGGACGATGATGCGGCGGAGTATGTGGATACGGATTCGTGCGTGAATTGGGGAGGGGAAGGGTATGGTTATGCTGTGATTGGGGACTTGCTGGCGAAGGACTTTAAACGGCAGTGTCGTATTAAGATGGTGGCGGCGGTTAGGTCGGATTGGGGCTCGTTGTTGTTAATGTCCAGTGGTGAACGACGTGTCGTGTCGTATGGGGATGTTCATAAGGTGGTGTCGTATGGGTTTGAGGTGTCGTGGTGGAAGCGAGCTTGTGATGACGTGGCTTGTCCGAGTACGAATCCCTGCGTTTACGAGCCCAGCACGGAAAGTATTGAATGCCAGCGACCTGTTTTGTGTTATAGTCCCATGGGAATTGAATATTGGAATTGTGgaaATTTGTCAAAGGCGCGCATATTTGCAGAAGATTATCTCTATGGTATTTATAAAGGACTACGCCAAATAATAGGGGTGGGTACATACGATCACTATACTCACTATGATTTCAGTTTAACACCTCTTGCAATTACCTCAGGAATAGTCACTGGAAATTACATTATACCATACATTACAGCCAGAGTTCTATTTGGTATCACATTTCTCTCTGCACTATTGATCTATACATGTCAAAGAAGACACTTATCAGTTTATGAAAATATCGAAGACTTTTTGCAACTTCATGACCTCATTCCAATAAGGTATTCCTACAAGGAATTAAAGACAATGACCAAAGGTTTCAAGAACAAGTTAGGTCAAGGGGGTTTTGGCAAAGTATACAAAGGGAAGCTAAGTAGTGGACTTGATGTAGCTATCAAAATGTTGGGTAAATCCGAAGCTAATGGCCAAGATTTCATAAGTGAAGTGGCAACTATTGGGAGGATACATCATTTCAATGTGGTAAGACTTGTTGGGTTCTGTGTGGAAGGAAGAAAACGTGCTCTTGTTTATGAATTCATGTCTAATGGATCTCTAGATAAGTATATTTTCTCTAAAGAAGGAAGTGTCCCTTTAAGTTATGAGAAAATATATGAGATATCTCTGGGAGTGACTCGTGGGATTGCTTATCTTCATCATGGTTGTGATATGCAAATATTGCATTTTGATATCAAGCCTCACAATATTCTTCTGGATGAAAATTTTATTCCGAAAGTTTCGGATTTCGGACTCGCAAGATTGTATCCTGTTGATGATAGTATTGTCACTTTGACTGTAGCAAGAGGAACAATAGGCTACATGGCTCCTGAATTGTTCTACAAGAATATTGGGGGAGTGTCCTATAAGGCCGATGTGTATAGTTTTGGGATGCTTTTGATGGAAATGGCAAGTAGGAAGAGAAACTCGGATTCACATACAGAAAATTCGAGTCAATTTTACTTTCCTCTATGGATTTATGACCAATTCAATGAAGTGAAGGATTTAGAAATAGAGGATTTGACAAAAGAGGAAAAGGATTTAGCAAAGAAGATGTTTATAGTAGCATTATGGTGTATACAATTGAAGCCTATTGATCGTCCCTCAATGAAGAGAGTAGTAGAAATGTTGGAAGCAGATGATATTGAGAGTCTTGAAATGCCTCCAAAGCCTTCTCTTTATCCTAATGAAAGAAATGTATATGATATTGGATCCAACTTTGACCAAAGTACATCCTTCTATACCATGGATTCTTCTAGTGATCTTGGGGAGGTTGCTAGTTATGAagaataa 2169 0.4242 MERGKGLIPRLWWCLFSFTLQILLTNCEAKSCAPSRCGTITDIHHPFRLPQDPPHCGDERYELACENNDTTTTLSLYSGKYRVLAINYNNFTIRLVDPGIQRGNCSSLPRYFLSQSNFSDTFNYSYGYDADPFRATQTSVQSETIFEHVVYLNCSDPVTVRDDDAAEYVDTDSCVNWGGEGYGYAVIGDLLAKDFKRQCRIKMVAAVRSDWGSLLLMSSGERRVVSYGDVHKVVSYGFEVSWWKRACDDVACPSTNPCVYEPSTESIECQRPVLCYSPMGIEYWNCGNLSKARIFAEDYLYGIYKGLRQIIGVGTYDHYTHYDFSLTPLAITSGIVTGNYIIPYITARVLFGITFLSALLIYTCQRRHLSVYENIEDFLQLHDLIPIRYSYKELKTMTKGFKNKLGQGGFGKVYKGKLSSGLDVAIKMLGKSEANGQDFISEVATIGRIHHFNVVRLVGFCVEGRKRALVYEFMSNGSLDKYIFSKEGSVPLSYEKIYEISLGVTRGIAYLHHGCDMQILHFDIKPHNILLDENFIPKVSDFGLARLYPVDDSIVTLTVARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASRKRNSDSHTENSSQFYFPLWIYDQFNEVKDLEIEDLTKEEKDLAKKMFIVALWCIQLKPIDRPSMKRVVEMLEADDIESLEMPPKPSLYPNERNVYDIGSNFDQSTSFYTMDSSSDLGEVASYEE 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1455 722 PANTHER RUST RESISTANCE KINASE LR10-RELATED 19 700 IPR045874 GO:0004672
Sto12g1455 722 ProSiteProfiles Protein kinase domain profile. 399 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1455 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Sto12g1455 722 Gene3D Phosphorylase Kinase; domain 1 376 473 - -
Sto12g1455 722 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 19 700 - -
Sto12g1455 722 Pfam Wall-associated receptor kinase galacturonan-binding 32 97 IPR025287 GO:0030247
Sto12g1455 722 ProSitePatterns Protein kinases ATP-binding region signature. 405 427 IPR017441 GO:0005524
Sto12g1455 722 SMART serkin_6 399 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1455 722 CDD STKc_IRAK 405 670 - -
Sto12g1455 722 Pfam Protein kinase domain 402 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1455 722 SUPERFAMILY Protein kinase-like (PK-like) 385 670 IPR011009 -
Sto12g1455 722 Gene3D Transferase(Phosphotransferase) domain 1 474 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1455 Sto-Chr12 9931755 9938712 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1455 13 707 Receptor kinase-like Gene Family AT5G38260 34.861 5.62e-113 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto12g1455 Pkinase 5.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1455 - - ahf:112697889 748.429