Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1454 ATGTTATTACTGATATTCATGCTCATGAATCTCGTGACCGCTCAGAACCACCACAAGTGCACCCACACCACCAAATCTTGCGGCACCAACGAAATTCGCTTCCCTTTCCAGCTCCAAAACGACGCCGTTAGCAGCCCAAACACCCACTGCGGCTATCCCGGTTTCACCTTATCCTGCACAAAAAACAACCTCACAATCCTCGAACTCCCTTCGAATCCCGCGAGACTCTCCGTCAAATGGATAGACTACGAATCCCAGCGAGTACACGTGTACGACTCCCAAGCCTGTCTTCCCAGACTCTTCCTTCAACTCCAGAACTCATCGATTCATCCTTTCCAGTACGATTCGGAATCGCTGCTTCTCGAAGGTTCCAGAATCCCGTCCAGTGTTACGTTCTTCGATTGCTCTTCGGTTGGATCCAGGTATCTCCGAAACGACCACGTTTCGTTCTCGCTAGCGCAGGATATGTTCGCTTGCCCTATTTATGCGGCCGCGTCGGACCAGAGTGTTATTGATTTGGACCTGGTTTCGTGTACCAATATGTTCGAGATATCTTCATTGGTATCTGCTAAAACGGACCTTCCGATGAATATGTTAACGCTGAAATGGGGTGAATTGAAATGTGATGTTGGAAGTTTTTACTGCGATCACAAACCCAGTAAATTGCTTACAGTTGTTTTGCCAGTTACAGGTTCAATATTGCTAGTGCTGCTAttcattggattcttcctaatgTACAGATACTTCAAAATGAAAGGAGATGATGAAGTAAGGCTAGAAAAGTTTCTTGAAGATTATAGGGCACTTAGACCTACAAGATTTTCTTATGCTGACCTTAAGAGGATCACTAAAAATTTCAAGGACAAATTAGGGGAAGGAGCTCATGGAGCAGTTTTCAAAGGTGAACTTTCCACTGAAATCCCAGTAGCTGTAAAGGTACTCAATAATAACTCAGAAGGAGATGATGGCAAAGAGTTCATTGCTGAGGTGGGAACCATGGGCAAGATTCATCACATTAACGTCGTCCGGTTGCTAGGATTTTGCGCGGACGGGTTCGATCGAGCACTTGTCTATGATTTCTTCCCGAACGGTTCGCTACAGAAGTTCGTATCTTCTCCGGACAAGAAGGAGAACTTTCTGGGATGGCCAAGAGTGCAGCAAATAGCTCTTGGCATAGCTAGAGGGATTGAGTATCTTCACCAAGGTTGTGATCATCGGATTCTTCACTTCGACATCAATCCTCGTAATGTATTGTTGGATCACAATCTCACTCCCAAGATTACTGATTTCGGTTTGGCCAAATTGTGTTCGAAGAATCAAAGTACAGTTTCAATGACTGCAGCAAGAGGGACTTTAGGTTACATTGCACCAGAAGTTTTCTCTAGGAACTTTGGGAATGTGTCATATAAGTCAGATATTTACAGTTATGGGATGTTAATGCTAGAAATGGTTGGAGGAaggaaaaatacaataaaaaatgaagagacATTTCAAATTCTGTATCCAGAGTGGATTCATAATTTGGTAAAAGGAGGAGACATAGATATCCAcatagaagaggaagaagatggtaAGATTGCAAAGAAACTTGCAATTGTGGGACTTTGGTGTATTCAGTGGAATCCAATGAATCGTCCATCCATGAAAACAGTGGTGCAAATGGTAGAACAAGAAGGAGATAAATTGAAGGTTCCTCCTACCCCTTTTGACTCCACTACTTTATCTAATACAAATGCTATCATTCCCACCAGAAGAATGAATTTGGAGCTAGAAGTGATTCGTGAATTAGAATAA 1794 0.4158 MLLLIFMLMNLVTAQNHHKCTHTTKSCGTNEIRFPFQLQNDAVSSPNTHCGYPGFTLSCTKNNLTILELPSNPARLSVKWIDYESQRVHVYDSQACLPRLFLQLQNSSIHPFQYDSESLLLEGSRIPSSVTFFDCSSVGSRYLRNDHVSFSLAQDMFACPIYAAASDQSVIDLDLVSCTNMFEISSLVSAKTDLPMNMLTLKWGELKCDVGSFYCDHKPSKLLTVVLPVTGSILLVLLFIGFFLMYRYFKMKGDDEVRLEKFLEDYRALRPTRFSYADLKRITKNFKDKLGEGAHGAVFKGELSTEIPVAVKVLNNNSEGDDGKEFIAEVGTMGKIHHINVVRLLGFCADGFDRALVYDFFPNGSLQKFVSSPDKKENFLGWPRVQQIALGIARGIEYLHQGCDHRILHFDINPRNVLLDHNLTPKITDFGLAKLCSKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLMLEMVGGRKNTIKNEETFQILYPEWIHNLVKGGDIDIHIEEEEDGKIAKKLAIVGLWCIQWNPMNRPSMKTVVQMVEQEGDKLKVPPTPFDSTTLSNTNAIIPTRRMNLELEVIRELE 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1454 597 ProSiteProfiles Protein kinase domain profile. 284 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1454 597 Pfam Wall-associated receptor kinase galacturonan-binding 22 92 IPR025287 GO:0030247
Sto12g1454 597 Gene3D Transferase(Phosphotransferase) domain 1 361 565 - -
Sto12g1454 597 SUPERFAMILY Protein kinase-like (PK-like) 268 555 IPR011009 -
Sto12g1454 597 PANTHER RECEPTOR-LIKE KINASE 11 595 - -
Sto12g1454 597 Pfam Protein tyrosine and serine/threonine kinase 286 553 IPR001245 GO:0004672|GO:0006468
Sto12g1454 597 PANTHER RUST RESISTANCE KINASE LR10-RELATED 11 595 IPR045874 GO:0004672
Sto12g1454 597 Gene3D Phosphorylase Kinase; domain 1 260 360 - -
Sto12g1454 597 ProSitePatterns Protein kinases ATP-binding region signature. 290 312 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1454 Sto-Chr12 9927696 9930604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1454 250 568 Receptor kinase-like Gene Family AT1G66910 48.930 4.15e-100 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto12g1454 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1454 - - gmx:100819302 632.098