Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1449 ATGGAACCTCGTGTTGGTAATAAGTTTCGGCTGGGACGGAAGATCGGTAGCGGCTCGTTTGGGGAGATCTATTTAGGTACTAATATTCAAACCAACGAGGAGGTCGCAATTAAGCTTGAAAATGTCAAGACAAAGCATCCTCAGCTGCTGTATGAGTCCAAGTTATACAGAATTCTCCAGGGAGGAACTGGAATTCCAAATGTTAAATGGTTTGGAGTGGAGGGAGATTACAATATTCTTGTGATAGATCTTCTTGGACCTAGTCTTGAAGATCTATTTAACTTCTGCAATAGAAAGCTCTCACTGAAGGCAGTTCTCATGCTTGCAGATCAAATGATCAACCGTGTTGAGTTTGTTCATTCTAAATCATTTCTGCATCGAGATATCAAACCAGATAATTTTCTCATGGGCTTAGGAAGGCGTGCAAACCAGGTTTACGTTATTGATTTTGGTTTGGCTAAAAAATACAGAGACAGTTCAACCCATCAACACATTCCTTACAGGGAAAATAAGAATTTGACAGGAACTGCAAGATATGCTAGCATGAATACTCACCTTGGCATTGAACAAAGCCGAAGAGATGATTTGGAGTCCCTAGGTTATGTTTTGATGTACTTCCTACGAGGAAGTCTTCCTTGGCAGGGACTCAAAGCAGGAACAAAGAAACAAAAGTATGAGAGGATAAGTGAAAAAAAGGTTTCTACCTCGATTGAGTCCTTGTGTCGAGGTTATCCAACAGAATTTGCATCATACTTCCATTACTGCCGTTCATTAAGATTTGATGATAAGCCAGATTACGCTTACCTCAAAAGGATATTTCGCGACCTCTTTATTCGTGAAGGTTTCCAGTTCGATTATGTGTTTGACTGGACCATTTTGAAGTATCAGCAATCGCAGCTGGCCAATCCACCGACACGAGCCCTTGGTCCTATTGCTGGAACTAGTTCTGGAATGCCTCCTGCTGTAACTAATGCTGATGGACAGACAGCAGGGGAAGAAGGGCGACCGGGAGGTATTGTTTCAGGGGATTCTTCAAGACGGAGGATGCCCATGCCCAATTTAAATTCTGTAAGTTCTCCAAAGCAGATGCAGTTATCAAGAGGGGCCAATATCTTGGGACTGCCAGGTGGGTCATCAAGGCAAGTTGCTGTTTCAAGTAGCCGCGATGCCTTTGTTGGTGGTGATGGGCAAAGAAGTTCACCGATTGGAGCTTCGGATTCCAAGAGAGTGTCATCTGCAAGACATGCTTCTCATGCCAAGAATTATGAAACTACAATGAAGGGCATTGAGAGTTTGCAGTTAGAGAATGATGAGAGAACCCACTAG 1326 0.4306 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVKWFGVEGDYNILVIDLLGPSLEDLFNFCNRKLSLKAVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYVIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYERISEKKVSTSIESLCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLANPPTRALGPIAGTSSGMPPAVTNADGQTAGEEGRPGGIVSGDSSRRRMPMPNLNSVSSPKQMQLSRGANILGLPGGSSRQVAVSSSRDAFVGGDGQRSSPIGASDSKRVSSARHASHAKNYETTMKGIESLQLENDERTH 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1449 441 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1449 441 MobiDBLite consensus disorder prediction 374 441 - -
Sto12g1449 441 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Sto12g1449 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Sto12g1449 441 MobiDBLite consensus disorder prediction 309 350 - -
Sto12g1449 441 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 421 IPR030509 GO:0004672|GO:0005524
Sto12g1449 441 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Sto12g1449 441 Pfam Protein kinase domain 10 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1449 441 Gene3D Transferase(Phosphotransferase) domain 1 1 308 - -
Sto12g1449 441 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1449 441 PANTHER CASEIN KINASE-RELATED 1 421 - -
Sto12g1449 441 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1449 Sto-Chr12 9896491 9900109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1449 7 223 EF-hand Containing Proteins AT2G17890 25.333 2.32e-12 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Sto12g1449 Pkinase 2.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1449 K02218 - gmx:100811567 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1449 12 9896491 9900109 Sto12g1449 12 9896491 9900109 ECH