Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1445 ATGGACTCAAGAATTGGATTTTCCGATTCCAATGAAatgagtaataataataataatagcagcGCCATATGCTGCTTAGAGTCTTCTTCTCCGTCTCCTTCGGACGACGTCGTAGCCCTAAGGCGCCTCTCGAAGAATCTCGAATCAATCTTCTCCGTCGATTCCGACGACTTCTTCGCCGACGCCAGAATCGTTCTCGCGGACGGTCGCGAAGTTCCGGTCCACCGGTGCATTCTATCGGCGAGGAGCCCTTTCTTGAAGGAGGCGTTGGGCGCGAAGAAGGAGAAGCTGGAATTGAAGGAATTGTTGGGTAGGGATTGTTGCGAGATTGGGCTGGACGCGATTGTGGGAGTTTTGGGGTATTTGTACAGCGGGAAGGTGATGAGGTCGTTGCCTGAaggtgtttgtgtgtgtgtggacGATGATTGCTCCCATTTTGGGTGCCGACCTGCTGTGAATTTCATGGCGGAAGTGTTGTATGCTTCCTCTGTGTTTCAGATTCCTGAATTGGTTTCTCTTTATCAGGACATGAAGGCTTTCTTAACACAGCTTGATGACATGAGGTATTTACTACACATTCTTGACAAAGTTGCAGCAGATGACATTTTgttggttctttatgttgcaAACTTATGTGGTAAATCCTGTGAGAAACTACTGTCAAAGTGTACAGAAATGATCGTTAAATCTGATGTTGATGTCATTACACTTGAAAAGACATTGCCACAACATGTTGTGAAACAAATCATTGATCAACGTATAGAACTTGGCTCAGAAAGGCTCAACAATGTCAGTTTACCAGACAAACATGTGAAGAGAATACACAGGGCTCTCGATTCGGACGATGTTGAGTTAGTTCAATTGCTCTTGAGGGAGGGACATACTAATCTAGATGAGGCCTATGCCCTCCACTATGCTGTTGCATACTGTGATGCCAAGACCACCACTGAGCTTCTTGATCTTGGACTTGCTGATGTTAACTGTAGAAATCCTAGGGGATATAGTGTGCTGCATGTGGCTGCAATGAGGAAGGAGCCAAAGATTATAGTGTCCCTCTTGACAAAGGGAGCACAGCCTTCTGATCTCACTTTGGATGGCAGGAAGGCCCTTCAGATTCTGAAGCGGCTCACGAAGGCTGTGGATTATTATAATTCCACAGAGGAAGGAAAGGCGTCGTCGAAAGATCGATTGTGTATAGAGATATTGGAgcaagctgagagaagagagcCTATACTTGGGGaggcttctctttctcttgcaATGGCAGGAGATGATCTAAGAATGAAATTGTTGTATCTTGAAAACAGAGTTGGATTGGCAAAGCTATTGTTCCCCATGGAAGCAAAAGTTGTGATGGATATTGCTCAAGTTGATGGAACTTGTGAATTCCCATTGTTAGACATCAATCTGCATGTCGGTAATAATACTCAGCGGACCACGGTGGACTTAAACGAGGCACCCTATAGAATTAAGGAAGAACATCTAATCAGGATGAGAGCACTCTCTAGAACTGTGGAATTAGGGAAACGATTCTTCCCTCGTTGCTCGGAGGTACTGAACAAAATCATGGATGCCGATGACCTATCTCAACTTGCATGTATGGGTGATGAAACTCCTGAAGAGAGACAAGTGAAGAGAAGAAGGTACATGGAGCTCCAAGAAGTTCTGAGTAAGGCCTTCAATGAGGACAAGGAGGAGTTTGATAAGTCGGGTgtgtcatcatcttcttcttcaacatCAATAGAAATAACTAGGAGGCATTCCATGAAGAACTAG 1776 0.4172 MDSRIGFSDSNEMSNNNNNSSAICCLESSSPSPSDDVVALRRLSKNLESIFSVDSDDFFADARIVLADGREVPVHRCILSARSPFLKEALGAKKEKLELKELLGRDCCEIGLDAIVGVLGYLYSGKVMRSLPEGVCVCVDDDCSHFGCRPAVNFMAEVLYASSVFQIPELVSLYQDMKAFLTQLDDMRYLLHILDKVAADDILLVLYVANLCGKSCEKLLSKCTEMIVKSDVDVITLEKTLPQHVVKQIIDQRIELGSERLNNVSLPDKHVKRIHRALDSDDVELVQLLLREGHTNLDEAYALHYAVAYCDAKTTTELLDLGLADVNCRNPRGYSVLHVAAMRKEPKIIVSLLTKGAQPSDLTLDGRKALQILKRLTKAVDYYNSTEEGKASSKDRLCIEILEQAERREPILGEASLSLAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVVMDIAQVDGTCEFPLLDINLHVGNNTQRTTVDLNEAPYRIKEEHLIRMRALSRTVELGKRFFPRCSEVLNKIMDADDLSQLACMGDETPEERQVKRRRYMELQEVLSKAFNEDKEEFDKSGVSSSSSSTSIEITRRHSMKN 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1445 591 Gene3D Potassium Channel Kv1.1; Chain A 32 179 IPR011333 -
Sto12g1445 591 PANTHER REGULATORY PROTEIN NPR3 3 588 IPR044292 GO:0009862|GO:2000022|GO:2000031
Sto12g1445 591 ProSiteProfiles Ankyrin repeat profile. 332 364 IPR002110 GO:0005515
Sto12g1445 591 MobiDBLite consensus disorder prediction 563 591 - -
Sto12g1445 591 PANTHER REGULATORY PROTEIN NPR2 3 588 - -
Sto12g1445 591 SUPERFAMILY POZ domain 51 176 IPR011333 -
Sto12g1445 591 SMART ANK_2a 269 297 IPR002110 GO:0005515
Sto12g1445 591 SMART ANK_2a 298 328 IPR002110 GO:0005515
Sto12g1445 591 SMART ANK_2a 332 361 IPR002110 GO:0005515
Sto12g1445 591 Gene3D - 244 465 IPR036770 -
Sto12g1445 591 Pfam BTB/POZ domain 57 176 IPR000210 GO:0005515
Sto12g1445 591 ProSiteProfiles BTB domain profile. 60 131 IPR000210 GO:0005515
Sto12g1445 591 Pfam NPR1/NIM1 like defence protein C terminal 374 579 IPR021094 -
Sto12g1445 591 CDD BTB_POZ_NPR_plant 41 176 - -
Sto12g1445 591 SUPERFAMILY Ankyrin repeat 271 374 IPR036770 -
Sto12g1445 591 SMART BTB_4 60 182 IPR000210 GO:0005515
Sto12g1445 591 Pfam Domain of unknown function (DUF3420) 231 275 IPR024228 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1445 Sto-Chr12 9860183 9865915 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Sto12g1445 NPR1_like_C 2.6e-94 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1445 K14508 - tcc:18588372 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1445 12 9860183 9865915 Sto12g1445 12 9860183 9865915 ECH