Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1403 ATGACTATTTTTCAATTGTCAGGGCATGTAAAACTTCCTCTAGGTACTCCTGTTGGTGATTTTCCAATTGGAACAGAGCTGCTTACTTCATTTTCAAGTGATCATAGAATTGATGACTTGCAAAAATGTGGAGGGGTCAAATGGTTGGCGGATTTGTTGAAAACCAATGTAGAGAATGGAATTCAAGGTGACGACGCTGATTTAATAAAACGGAGGAATGcctttggttcaaacaattatCCAAGAAAGAAGGGAAGGAATTTCTTGTTGTTCATGTGGGATGCTTGTAAGGATCTGACTTTGATTATATTGATGGTAGCAGCAGTGGTTTTATTGGCACTGGGAATAAAATCTGAGGGTTCCAAGGAAGGATGGGTTGATGGGGGAAGCATCGCATTTGCAATTATTCTTGTTATTGTTGTTACAGCTATAAGTGATTATAGGGAGGCTCTTCAGTTTCAAGATGTAAATGAGGAGAAGAGAAACATAAATGTAGAGGTCAGCCATGAGCAGGTTATTAGAAATGGTAGAAGAGTTAAGATCTCAATATATGATATTGCTGTTGGTGATGTTGTGCCCCTTAATATCGGTGACCAGGTCCCTGCTGATGGAATCTTGATAACTGGCCACTCTCTTGCAATCGATGAATCAAGTATGACTGGGGAGAGCAAGATTGTTTACAAGGACTCAAAGGATCCATTTCTGATGTCTGGATGCAAAGTTGCAGATGGCACTGGCACTATGCTGGTTACAGCTGTTGGTATTAATACTGAGTGGGGGCTTCTAATGGCTAGTACATCAGAAGACAATGGTGAAGAAACACCTTTGCAGGTATATTTAAATGCCCTTGCCACCTTTATTGGTATTGTTGGACTCATTGTGGCTGCTGTTGTTCTCATTGTGCTATTAATCAGATTCTTTACTGGACATATTGCAAAAAGTGTTCAATTTGAGATTGGAAAGACAAAAGTCGGTAATACTATTCATGGAGTAACTAAGATAGTTGCAATTGTGGTCACCATTGTAGTGGTTGCGGTGCTTGAAGGGCTTCCTTTAGCAGTCACCTTAATACTTGCTTACTCGATGACAAAGATGATAGGAGATAAAGCCTTGGTAAGGAGGCTTTCAGCCTCTGAAACAATGGGTTCTGCCACAACCATTTGCAGTGATAAAACTGGAACACTGACTTTGAATCAGtgttaa 1203 0.3957 MTIFQLSGHVKLPLGTPVGDFPIGTELLTSFSSDHRIDDLQKCGGVKWLADLLKTNVENGIQGDDADLIKRRNAFGSNNYPRKKGRNFLLFMWDACKDLTLIILMVAAVVLLALGIKSEGSKEGWVDGGSIAFAIILVIVVTAISDYREALQFQDVNEEKRNINVEVSHEQVIRNGRRVKISIYDIAVGDVVPLNIGDQVPADGILITGHSLAIDESSMTGESKIVYKDSKDPFLMSGCKVADGTGTMLVTAVGINTEWGLLMASTSEDNGEETPLQVYLNALATFIGIVGLIVAAVVLIVLLIRFFTGHIAKSVQFEIGKTKVGNTIHGVTKIVAIVVTIVVVAVLEGLPLAVTLILAYSMTKMIGDKALVRRLSASETMGSATTICSDKTGTLTLNQC 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1403 400 Pfam Cation transporter/ATPase, N-terminus 48 110 IPR004014 -
Sto12g1403 400 SUPERFAMILY Calcium ATPase, transmembrane domain M 44 382 IPR023298 -
Sto12g1403 400 Gene3D - 94 384 - -
Sto12g1403 400 Gene3D - 385 397 IPR023214 -
Sto12g1403 400 PANTHER CATION TRANSPORTING ATPASE 17 399 - -
Sto12g1403 400 PANTHER CALCIUM-TRANSPORTING ATPASE 9, PLASMA MEMBRANE-TYPE 17 399 - -
Sto12g1403 400 ProSitePatterns E1-E2 ATPases phosphorylation site. 390 396 IPR018303 -
Sto12g1403 400 PRINTS Sodium/potassium-transporting ATPase signature 102 116 - -
Sto12g1403 400 PRINTS Sodium/potassium-transporting ATPase signature 129 149 - -
Sto12g1403 400 PRINTS Sodium/potassium-transporting ATPase signature 381 400 - -
Sto12g1403 400 PRINTS P-type cation-transporting ATPase superfamily signature 215 229 - -
Sto12g1403 400 PRINTS P-type cation-transporting ATPase superfamily signature 388 400 - -
Sto12g1403 400 SMART Cation_ATPase_N_a_2 44 116 IPR004014 -
Sto12g1403 400 SUPERFAMILY Calcium ATPase, transduction domain A 171 262 IPR008250 -
Sto12g1403 400 Gene3D - 68 267 - -
Sto12g1403 400 Pfam E1-E2 ATPase 168 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1403 Sto-Chr12 9491484 9498910 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1403 16 399 Primary Pumps ATPases AT5G57110 71.907 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1403 K01537 - gmx:100792945 538.495