Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1401 ATGAGTTTCTGGAAAATTTCTCCTTATCGCCGTCGCAACGATCTAGAGGCCGTCAGTAACGTCGCCGACGGCGGCGACGACTTCGAGGATTTGTCCGATCCATTTGATATCCCTCGCCGCACAAAGAATGCTCCCGTTGAACGTCTCAAGCGTTGGAGGcaaCAGGCACTTGTGCTTAATGCTTCTCGGCGATTCCGTTACACCTTGGacttgaaaaaagaagaagagaagcagCAAATAATTAGGAAGATTAGGAATCATGCTCAAGCCATTAGAGCTGCATATCTATTCAAAGAAGCAGGCCGGAGTGAGAGTGGGACACTGGCTCTAGCTGCTCCTGGTGGTGATTTTCCAATTGGAACAGAGCAGCTTACTTCAATTTCAAGGGATCACAAAAGTGATCTCTTGCAAGAATGTGGAGGGGTCAAAGGGTTGGCTGATTTGCTGAAAAGCAATGTAGAGAAGGGGATTGAAGGTGACGACGCTGATTTAATAAAACGGAGGAATGCCTTTGGTTCGAACAATTATCCTCGGAAGAAGGGAAGGAATTTCTTGTTGTTCGTGTGGGATGCTTGCAACGATCTGACCTTGATCATATTGATGATAGCAGCAGTGGTTTTATTGGCACTGGGAATAAAATCTGAGGGTTCCAAGGATGGATGGGTTGATGGGGGAAGCATCGCATTTGCAGTTATTCTTGTTATTGTTGTTACAGTTTACTTGATCTTTAAATTTAAGGTCAGCTATGAGCAGGTTATTAGAAATGGTAGAAGAGTTAAGATCTCAATATATGATATTGCTGTTGGTGATGTTGTGCCGCTTAATATCGGTGACCAGGTCCCTGCTGATGGAATCTTGATAACTGGCCACTCTCTTGAAATTGATGAATCAAGTATGACTGGGGAGAGCAAGATTGTTCACAAGGACTCAAAGTATCCATTTCTGATGTCTGGATGCAAAGTTGCAGATGGCACTGGCACTATGCTGGTTACAGCTGTTGGTATTAATACTGAGTGGGGGCTTCTAATGGGTAGTACATCAGAAGACAATGGTGAAGAAACACCTTTGCAGGTCACCATTGTAGTGGTTGCGGTGCTTGAAGGGCTTCCTTTGGCAGTTACCTTAATGTAA 1131 0.4359 MSFWKISPYRRRNDLEAVSNVADGGDDFEDLSDPFDIPRRTKNAPVERLKRWRQQALVLNASRRFRYTLDLKKEEEKQQIIRKIRNHAQAIRAAYLFKEAGRSESGTLALAAPGGDFPIGTEQLTSISRDHKSDLLQECGGVKGLADLLKSNVEKGIEGDDADLIKRRNAFGSNNYPRKKGRNFLLFVWDACNDLTLIILMIAAVVLLALGIKSEGSKDGWVDGGSIAFAVILVIVVTVYLIFKFKVSYEQVIRNGRRVKISIYDIAVGDVVPLNIGDQVPADGILITGHSLEIDESSMTGESKIVHKDSKYPFLMSGCKVADGTGTMLVTAVGINTEWGLLMGSTSEDNGEETPLQVTIVVVAVLEGLPLAVTLM 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1401 376 Pfam E1-E2 ATPase 248 363 - -
Sto12g1401 376 SMART Cation_ATPase_N_a_2 141 212 IPR004014 -
Sto12g1401 376 Gene3D - 190 362 - -
Sto12g1401 376 Pfam Cation transporter/ATPase, N-terminus 141 206 IPR004014 -
Sto12g1401 376 SUPERFAMILY Calcium ATPase, transduction domain A 251 342 IPR008250 -
Sto12g1401 376 Pfam Ca2+-ATPase N terminal autoinhibitory domain 31 76 IPR024750 GO:0005516
Sto12g1401 376 PANTHER - 5 353 IPR000528 GO:0006869|GO:0008289
Sto12g1401 376 SUPERFAMILY Calcium ATPase, transmembrane domain M 140 375 IPR023298 -
Sto12g1401 376 Gene3D - 45 100 - -
Sto12g1401 376 Gene3D - 164 347 - -
Sto12g1401 376 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 5 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1401 Sto-Chr12 9468029 9478311 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1401 7 369 Primary Pumps ATPases AT4G29900 63.757 2.65e-154 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1401 K01537 - gmx:100792945 457.988