Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1398 ATGAGTTTCTTGAAGGGTTCGCCTCGCCGCCAGAATGATATTGAGGCCGGGAGTAGCCGGTCCGGTGACTTTGACGACGGGGAGGGCTCGTCGGATCCATTTGATATCACCAGTACTAAGAATGCTTCCATTGAACGCCTGAAGCGATGGAGGCAAGCTGCACTTGTACTTAATGCTTCTCGGCGATTTCGTTACACTCTGGACTtgaaaaaggaagaagagaaaaagcaaATATTGAGGAAGATTAGGGCGCATGCGCAAGCCATTAGAGCTGCATATCTTTTCAAAGAAGCTGGGCTGAGTGTGACTGGTACTGAAGTACCTCCTCCTGCTGCTCCTGGTGACTTTCCTATTGGACCAGAGCACCTTGCTTCAATTTCAAGGGATCATAAAAATGAAGTCCTGCAGCAATATGGAGGGGTTAGAGGGCTGGCTGATTCGTTGAAAACCAATTTAGAGAAGGGGATTGGGGGTGACGATGCTGACTTAATAAAACGGAGGAATGCTTTTGGCTCAAACAATTATCCTCGAAAGAAAGGAAGGAGTTTTTTGATGTTTCTGTGGGATGCTTGCAAGGATCTGACCTTGATTATATTAATAGTAGCAGCAGTGGCTTCATTGGCACTGGGAATAAAATCTGAGgGTATCAAGGAAGGATGGTATGATGGGGGAAGCATCGCGTTTGCAGTTATTCTTGTTATTGTGGTTACAGCTATAAGTGATTATAAGCAGTCGCTTCAGTTTCGAGATCTAAATGAGGAGAAGAGAAACATACATCTAGAGGTTATTAGGAATGGTAGAAGAGTTGAGATCTCAATATATGATATAGTTGTTGGCGATGTTATACCCCTTAATATTGGTAACCAGGTTCCTGCTGATGGTATTTTGATCACTGGTCACTCTCTAGCAATTGATGAATCAAGTATGACTGGGGAGAGCAAGATTGTTCACAAGGACTCAAAGGACCCATTTCTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGCACTATGCTGGTTACAGGTGTTGGTATTAATACTGAATGGGGGCTTCTAATGGCTAGTATATCAGAAGACACTGGTGAAGAAACACCCTTGCAGGTACGCTTAAATGGTGTTGCCACCTTCATTGGTGTTGTTGGACTCACTGTGGCTGCTGCTGTCCTGGTTGTGCTACTGATCAGATATTTTACCGGGCATACAGAAAACGCAGATGGAAGTCCTCAGTTTACAGCAGGCAAGACAAAACTTAGTGATGCTGTTGATGGAGCAATTAAGATCGTCACTGTTGCGGTCACAATTGTAGTGGTTGCAGTGCCTGAAGGGCTTCCTTTAGCAGTTACCTTAACACTTGCTTACTCAATGAGAAAAATGATGGCGGACAAAGCTTTGGTGAGGAGGCTTTCGGCCTGCGAGACAATGGGTTCTGCCACAACCATTTGCAGTGATAAGACTGGAACATTAACTTTGAACCAGATGACTGTGGTTGAGGCTTACGTAGGTGGGAAGAAGATTGATCCTCCTCACAACAAATCAGAGCTCTCTGCTATGCTCTGCTCTTTGCTTGTTGAAGGTGTTGCACAGAACAGCAATGGCAGTGTTTATGTACCTGAGGGTGGTAACAATGTTGAGGTCACTGGATCACCTACAGAAAAGGCAATTTTAAATTGGGGAATCCAGTTGGGGATGAATTTCGAGACTGCCAGATCCGAATCATCAATTATACATGTATTTCCATTCAATTCTGATAAAAAGCGTGGTGGAGTTGCAGTGCAGACGCCTGACTCTCAAGTTCATATACATTGGAAAGGTGCGGCTGAGATAGTACTAGGCTGTTGTACATCATATATGGATGCTGATGACCAGTTAGTAGAGATGGATGAAGAAAAGatgaatttttttaaaaaagctaTTGAAGACATGGCTGCTGATAGTCTGCGTTGTGTTGCCATTGCATATAGATCATATGAAATGGAGAATGTTCCAACTAGTGAAGAGGAAATTGCTCACTGGTCGTTACCAGAGGAAGATCTTGTTTTATTGGCTATTGTTGGTCTGAAGGATCCTTGTAGACCTAGTGTCAAGGACTCAGTGCGACTTTGCCAAAAAGCTGGAGTGAAGGTACGGATGGTCACCGGTGACAATGTGCAAACTGCAAAAGCAATTGCCCTGGAATGTGGAATACTTGGTTCATCTGCAGATGCCACTGAGCCAAACATTATCGAAGGAAAAGTATTTCGTGCATTATCTGATTCGCAGAGAGATGAGATTGCTGAGAAGATATCGGTTATGGGACGATCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAGCATTGAGAAGGAAGGGGCATGTTGTGGCCGTAACTGGTGATGGAACTAATGATGCTCCTGCACTTCATGAGGCTGATATAGGTCTTGCAATGGGTATCCAAGGGACCGAAGTTGCTAAAGAGAGTTCTGATATAATTATTTTGGATGACAACTTTGCTTCGGTTGTGAAGGTTGTCCGATGGGGGCGTTCTGTATATGCAAATATTCAGAAATTTATCCAGTTTCAGCTAACTGTCAATGTGGCAGCTCTCATCATTAATGTTGTTGCAGCAGTTTCCTCTGGTGATGTCCCGTTAAATGCAGTGCAGCTTCTGTGGGTAAATCTGATTATGGATACGCTTGGAGCACTAGCCTTGGCAACTGAACCACCAACTGATCATCTAATGGACCGGTCTCCTGTGGGTCGAAGAGAACCTCTTATAACAAATATCATGTGGAGGAATTTGCTCATTCAGGCCATGTACCAAGTATCTGTTTTGCTTGTACTAAATTTCCAAGGTAAAAGCTTGCTGGGACTGAAACATGACAACAATGCCCATGCTATCAAAGTGAAGAACACTCTAATATTTAATGCGTTTGTTTTCTGTCAGATCTTTAatgaatttaatgctcgaaagcCAGATGAATACAACATATTCAAGGGAGTCACGAAAAATTACCTCTTCATGGGAATCGTGGGATTAACTCTAGTGCTTCAGATCATCATCATTGAATTTTTGGGAAAATTCACCAAAACAGTCAGGCTTAATTGGAAGCAGTGGATAATATCCGTTGTCATCGGTTTCATTGGCTGGCCTCTTGCTGTGGTTGGGAAGACGATACCTGTTCCAGAAACTTCCATCAATGAGTATTTTAAAAGATGCTTCCGGGGAAGAGCTTCTTCTACAAGGAAGGAAAATGATGGTGTGTAG 3243 0.4271 MSFLKGSPRRQNDIEAGSSRSGDFDDGEGSSDPFDITSTKNASIERLKRWRQAALVLNASRRFRYTLDLKKEEEKKQILRKIRAHAQAIRAAYLFKEAGLSVTGTEVPPPAAPGDFPIGPEHLASISRDHKNEVLQQYGGVRGLADSLKTNLEKGIGGDDADLIKRRNAFGSNNYPRKKGRSFLMFLWDACKDLTLIILIVAAVASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIHLEVIRNGRRVEISIYDIVVGDVIPLNIGNQVPADGILITGHSLAIDESSMTGESKIVHKDSKDPFLMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGVVGLTVAAAVLVVLLIRYFTGHTENADGSPQFTAGKTKLSDAVDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGKKIDPPHNKSELSAMLCSLLVEGVAQNSNGSVYVPEGGNNVEVTGSPTEKAILNWGIQLGMNFETARSESSIIHVFPFNSDKKRGGVAVQTPDSQVHIHWKGAAEIVLGCCTSYMDADDQLVEMDEEKMNFFKKAIEDMAADSLRCVAIAYRSYEMENVPTSEEEIAHWSLPEEDLVLLAIVGLKDPCRPSVKDSVRLCQKAGVKVRMVTGDNVQTAKAIALECGILGSSADATEPNIIEGKVFRALSDSQRDEIAEKISVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAMYQVSVLLVLNFQGKSLLGLKHDNNAHAIKVKNTLIFNAFVFCQIFNEFNARKPDEYNIFKGVTKNYLFMGIVGLTLVLQIIIIEFLGKFTKTVRLNWKQWIISVVIGFIGWPLAVVGKTIPVPETSINEYFKRCFRGRASSTRKENDGV 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1398 1080 Gene3D - 478 834 IPR023214 -
Sto12g1398 1080 SUPERFAMILY HAD-like 479 894 IPR036412 -
Sto12g1398 1080 MobiDBLite consensus disorder prediction 1 37 - -
Sto12g1398 1080 Gene3D - 161 357 - -
Sto12g1398 1080 CDD P-type_ATPase_Ca_PMCA-like 165 922 - -
Sto12g1398 1080 Pfam Ca2+-ATPase N terminal autoinhibitory domain 31 74 IPR024750 GO:0005516
Sto12g1398 1080 PRINTS Sodium/potassium-transporting ATPase signature 224 244 - -
Sto12g1398 1080 PRINTS Sodium/potassium-transporting ATPase signature 474 495 - -
Sto12g1398 1080 PRINTS Sodium/potassium-transporting ATPase signature 600 618 - -
Sto12g1398 1080 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 756 869 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto12g1398 1080 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 422 506 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto12g1398 1080 ProSitePatterns E1-E2 ATPases phosphorylation site. 483 489 IPR018303 -
Sto12g1398 1080 Gene3D - 42 98 - -
Sto12g1398 1080 Pfam Cation transporter/ATPase, N-terminus 139 206 IPR004014 -
Sto12g1398 1080 Pfam E1-E2 ATPase 259 459 - -
Sto12g1398 1080 PANTHER CALCIUM-TRANSPORTING ATPASE 21 1069 - -
Sto12g1398 1080 Pfam haloacid dehalogenase-like hydrolase 478 803 - -
Sto12g1398 1080 SUPERFAMILY Calcium ATPase, transduction domain A 259 354 IPR008250 -
Sto12g1398 1080 SFLD p-type atpase 463 841 IPR044492 -
Sto12g1398 1080 PRINTS P-type cation-transporting ATPase superfamily signature 305 319 - -
Sto12g1398 1080 PRINTS P-type cation-transporting ATPase superfamily signature 481 495 - -
Sto12g1398 1080 PRINTS P-type cation-transporting ATPase superfamily signature 682 693 - -
Sto12g1398 1080 PRINTS P-type cation-transporting ATPase superfamily signature 704 714 - -
Sto12g1398 1080 PRINTS P-type cation-transporting ATPase superfamily signature 789 808 - -
Sto12g1398 1080 PRINTS P-type cation-transporting ATPase superfamily signature 813 825 - -
Sto12g1398 1080 PANTHER CATION TRANSPORTING ATPASE 21 1069 - -
Sto12g1398 1080 SFLD C1.7: P-type atpase like 463 841 - -
Sto12g1398 1080 SUPERFAMILY Calcium ATPase, transmembrane domain M 138 1052 IPR023298 -
Sto12g1398 1080 Pfam Cation transporting ATPase, C-terminus 874 1047 IPR006068 -
Sto12g1398 1080 SMART Cation_ATPase_N_a_2 137 211 IPR004014 -
Sto12g1398 1080 Gene3D - 189 1040 - -
Sto12g1398 1080 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 488 686 IPR023299 GO:0000166
Sto12g1398 1080 Gene3D - 491 689 IPR023299 GO:0000166
Sto12g1398 1080 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 131 1053 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1398 Sto-Chr12 9424897 9439925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1398 2 1076 Primary Pumps ATPases AT5G57110 74.444 0.0 1622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1398 K01537 - gmx:100792945 1748.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1398 12 9424897 9439925 Sto12g1398 12 9424897 9439925 ECH