Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto12g1398 | ATGAGTTTCTTGAAGGGTTCGCCTCGCCGCCAGAATGATATTGAGGCCGGGAGTAGCCGGTCCGGTGACTTTGACGACGGGGAGGGCTCGTCGGATCCATTTGATATCACCAGTACTAAGAATGCTTCCATTGAACGCCTGAAGCGATGGAGGCAAGCTGCACTTGTACTTAATGCTTCTCGGCGATTTCGTTACACTCTGGACTtgaaaaaggaagaagagaaaaagcaaATATTGAGGAAGATTAGGGCGCATGCGCAAGCCATTAGAGCTGCATATCTTTTCAAAGAAGCTGGGCTGAGTGTGACTGGTACTGAAGTACCTCCTCCTGCTGCTCCTGGTGACTTTCCTATTGGACCAGAGCACCTTGCTTCAATTTCAAGGGATCATAAAAATGAAGTCCTGCAGCAATATGGAGGGGTTAGAGGGCTGGCTGATTCGTTGAAAACCAATTTAGAGAAGGGGATTGGGGGTGACGATGCTGACTTAATAAAACGGAGGAATGCTTTTGGCTCAAACAATTATCCTCGAAAGAAAGGAAGGAGTTTTTTGATGTTTCTGTGGGATGCTTGCAAGGATCTGACCTTGATTATATTAATAGTAGCAGCAGTGGCTTCATTGGCACTGGGAATAAAATCTGAGgGTATCAAGGAAGGATGGTATGATGGGGGAAGCATCGCGTTTGCAGTTATTCTTGTTATTGTGGTTACAGCTATAAGTGATTATAAGCAGTCGCTTCAGTTTCGAGATCTAAATGAGGAGAAGAGAAACATACATCTAGAGGTTATTAGGAATGGTAGAAGAGTTGAGATCTCAATATATGATATAGTTGTTGGCGATGTTATACCCCTTAATATTGGTAACCAGGTTCCTGCTGATGGTATTTTGATCACTGGTCACTCTCTAGCAATTGATGAATCAAGTATGACTGGGGAGAGCAAGATTGTTCACAAGGACTCAAAGGACCCATTTCTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGCACTATGCTGGTTACAGGTGTTGGTATTAATACTGAATGGGGGCTTCTAATGGCTAGTATATCAGAAGACACTGGTGAAGAAACACCCTTGCAGGTACGCTTAAATGGTGTTGCCACCTTCATTGGTGTTGTTGGACTCACTGTGGCTGCTGCTGTCCTGGTTGTGCTACTGATCAGATATTTTACCGGGCATACAGAAAACGCAGATGGAAGTCCTCAGTTTACAGCAGGCAAGACAAAACTTAGTGATGCTGTTGATGGAGCAATTAAGATCGTCACTGTTGCGGTCACAATTGTAGTGGTTGCAGTGCCTGAAGGGCTTCCTTTAGCAGTTACCTTAACACTTGCTTACTCAATGAGAAAAATGATGGCGGACAAAGCTTTGGTGAGGAGGCTTTCGGCCTGCGAGACAATGGGTTCTGCCACAACCATTTGCAGTGATAAGACTGGAACATTAACTTTGAACCAGATGACTGTGGTTGAGGCTTACGTAGGTGGGAAGAAGATTGATCCTCCTCACAACAAATCAGAGCTCTCTGCTATGCTCTGCTCTTTGCTTGTTGAAGGTGTTGCACAGAACAGCAATGGCAGTGTTTATGTACCTGAGGGTGGTAACAATGTTGAGGTCACTGGATCACCTACAGAAAAGGCAATTTTAAATTGGGGAATCCAGTTGGGGATGAATTTCGAGACTGCCAGATCCGAATCATCAATTATACATGTATTTCCATTCAATTCTGATAAAAAGCGTGGTGGAGTTGCAGTGCAGACGCCTGACTCTCAAGTTCATATACATTGGAAAGGTGCGGCTGAGATAGTACTAGGCTGTTGTACATCATATATGGATGCTGATGACCAGTTAGTAGAGATGGATGAAGAAAAGatgaatttttttaaaaaagctaTTGAAGACATGGCTGCTGATAGTCTGCGTTGTGTTGCCATTGCATATAGATCATATGAAATGGAGAATGTTCCAACTAGTGAAGAGGAAATTGCTCACTGGTCGTTACCAGAGGAAGATCTTGTTTTATTGGCTATTGTTGGTCTGAAGGATCCTTGTAGACCTAGTGTCAAGGACTCAGTGCGACTTTGCCAAAAAGCTGGAGTGAAGGTACGGATGGTCACCGGTGACAATGTGCAAACTGCAAAAGCAATTGCCCTGGAATGTGGAATACTTGGTTCATCTGCAGATGCCACTGAGCCAAACATTATCGAAGGAAAAGTATTTCGTGCATTATCTGATTCGCAGAGAGATGAGATTGCTGAGAAGATATCGGTTATGGGACGATCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAGCATTGAGAAGGAAGGGGCATGTTGTGGCCGTAACTGGTGATGGAACTAATGATGCTCCTGCACTTCATGAGGCTGATATAGGTCTTGCAATGGGTATCCAAGGGACCGAAGTTGCTAAAGAGAGTTCTGATATAATTATTTTGGATGACAACTTTGCTTCGGTTGTGAAGGTTGTCCGATGGGGGCGTTCTGTATATGCAAATATTCAGAAATTTATCCAGTTTCAGCTAACTGTCAATGTGGCAGCTCTCATCATTAATGTTGTTGCAGCAGTTTCCTCTGGTGATGTCCCGTTAAATGCAGTGCAGCTTCTGTGGGTAAATCTGATTATGGATACGCTTGGAGCACTAGCCTTGGCAACTGAACCACCAACTGATCATCTAATGGACCGGTCTCCTGTGGGTCGAAGAGAACCTCTTATAACAAATATCATGTGGAGGAATTTGCTCATTCAGGCCATGTACCAAGTATCTGTTTTGCTTGTACTAAATTTCCAAGGTAAAAGCTTGCTGGGACTGAAACATGACAACAATGCCCATGCTATCAAAGTGAAGAACACTCTAATATTTAATGCGTTTGTTTTCTGTCAGATCTTTAatgaatttaatgctcgaaagcCAGATGAATACAACATATTCAAGGGAGTCACGAAAAATTACCTCTTCATGGGAATCGTGGGATTAACTCTAGTGCTTCAGATCATCATCATTGAATTTTTGGGAAAATTCACCAAAACAGTCAGGCTTAATTGGAAGCAGTGGATAATATCCGTTGTCATCGGTTTCATTGGCTGGCCTCTTGCTGTGGTTGGGAAGACGATACCTGTTCCAGAAACTTCCATCAATGAGTATTTTAAAAGATGCTTCCGGGGAAGAGCTTCTTCTACAAGGAAGGAAAATGATGGTGTGTAG | 3243 | 0.4271 | MSFLKGSPRRQNDIEAGSSRSGDFDDGEGSSDPFDITSTKNASIERLKRWRQAALVLNASRRFRYTLDLKKEEEKKQILRKIRAHAQAIRAAYLFKEAGLSVTGTEVPPPAAPGDFPIGPEHLASISRDHKNEVLQQYGGVRGLADSLKTNLEKGIGGDDADLIKRRNAFGSNNYPRKKGRSFLMFLWDACKDLTLIILIVAAVASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIHLEVIRNGRRVEISIYDIVVGDVIPLNIGNQVPADGILITGHSLAIDESSMTGESKIVHKDSKDPFLMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGVVGLTVAAAVLVVLLIRYFTGHTENADGSPQFTAGKTKLSDAVDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGKKIDPPHNKSELSAMLCSLLVEGVAQNSNGSVYVPEGGNNVEVTGSPTEKAILNWGIQLGMNFETARSESSIIHVFPFNSDKKRGGVAVQTPDSQVHIHWKGAAEIVLGCCTSYMDADDQLVEMDEEKMNFFKKAIEDMAADSLRCVAIAYRSYEMENVPTSEEEIAHWSLPEEDLVLLAIVGLKDPCRPSVKDSVRLCQKAGVKVRMVTGDNVQTAKAIALECGILGSSADATEPNIIEGKVFRALSDSQRDEIAEKISVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAMYQVSVLLVLNFQGKSLLGLKHDNNAHAIKVKNTLIFNAFVFCQIFNEFNARKPDEYNIFKGVTKNYLFMGIVGLTLVLQIIIIEFLGKFTKTVRLNWKQWIISVVIGFIGWPLAVVGKTIPVPETSINEYFKRCFRGRASSTRKENDGV | 1080 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto12g1398 | 1080 | Gene3D | - | 478 | 834 | IPR023214 | - | |
Sto12g1398 | 1080 | SUPERFAMILY | HAD-like | 479 | 894 | IPR036412 | - | |
Sto12g1398 | 1080 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Sto12g1398 | 1080 | Gene3D | - | 161 | 357 | - | - | |
Sto12g1398 | 1080 | CDD | P-type_ATPase_Ca_PMCA-like | 165 | 922 | - | - | |
Sto12g1398 | 1080 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 31 | 74 | IPR024750 | GO:0005516 | |
Sto12g1398 | 1080 | PRINTS | Sodium/potassium-transporting ATPase signature | 224 | 244 | - | - | |
Sto12g1398 | 1080 | PRINTS | Sodium/potassium-transporting ATPase signature | 474 | 495 | - | - | |
Sto12g1398 | 1080 | PRINTS | Sodium/potassium-transporting ATPase signature | 600 | 618 | - | - | |
Sto12g1398 | 1080 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 756 | 869 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Sto12g1398 | 1080 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 422 | 506 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Sto12g1398 | 1080 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 483 | 489 | IPR018303 | - | |
Sto12g1398 | 1080 | Gene3D | - | 42 | 98 | - | - | |
Sto12g1398 | 1080 | Pfam | Cation transporter/ATPase, N-terminus | 139 | 206 | IPR004014 | - | |
Sto12g1398 | 1080 | Pfam | E1-E2 ATPase | 259 | 459 | - | - | |
Sto12g1398 | 1080 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 21 | 1069 | - | - | |
Sto12g1398 | 1080 | Pfam | haloacid dehalogenase-like hydrolase | 478 | 803 | - | - | |
Sto12g1398 | 1080 | SUPERFAMILY | Calcium ATPase, transduction domain A | 259 | 354 | IPR008250 | - | |
Sto12g1398 | 1080 | SFLD | p-type atpase | 463 | 841 | IPR044492 | - | |
Sto12g1398 | 1080 | PRINTS | P-type cation-transporting ATPase superfamily signature | 305 | 319 | - | - | |
Sto12g1398 | 1080 | PRINTS | P-type cation-transporting ATPase superfamily signature | 481 | 495 | - | - | |
Sto12g1398 | 1080 | PRINTS | P-type cation-transporting ATPase superfamily signature | 682 | 693 | - | - | |
Sto12g1398 | 1080 | PRINTS | P-type cation-transporting ATPase superfamily signature | 704 | 714 | - | - | |
Sto12g1398 | 1080 | PRINTS | P-type cation-transporting ATPase superfamily signature | 789 | 808 | - | - | |
Sto12g1398 | 1080 | PRINTS | P-type cation-transporting ATPase superfamily signature | 813 | 825 | - | - | |
Sto12g1398 | 1080 | PANTHER | CATION TRANSPORTING ATPASE | 21 | 1069 | - | - | |
Sto12g1398 | 1080 | SFLD | C1.7: P-type atpase like | 463 | 841 | - | - | |
Sto12g1398 | 1080 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 138 | 1052 | IPR023298 | - | |
Sto12g1398 | 1080 | Pfam | Cation transporting ATPase, C-terminus | 874 | 1047 | IPR006068 | - | |
Sto12g1398 | 1080 | SMART | Cation_ATPase_N_a_2 | 137 | 211 | IPR004014 | - | |
Sto12g1398 | 1080 | Gene3D | - | 189 | 1040 | - | - | |
Sto12g1398 | 1080 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 488 | 686 | IPR023299 | GO:0000166 | |
Sto12g1398 | 1080 | Gene3D | - | 491 | 689 | IPR023299 | GO:0000166 | |
Sto12g1398 | 1080 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 131 | 1053 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto12g1398 | Sto-Chr12 | 9424897 | 9439925 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto12g1398 | 2 | 1076 | Primary Pumps ATPases | AT5G57110 | 74.444 | 0.0 | 1622 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto12g1398 | K01537 | - | gmx:100792945 | 1748.02 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Sto12g1398 | 12 | 9424897 | 9439925 | Sto12g1398 | 12 | 9424897 | 9439925 | ECH |