Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1372 ATGGCTGCTGATCATGAGGTGAAGAACAAGGCGGCGGCCAGAAAGTTCGAGAAGAGCTATTTCGACGTGGTAGGGTTGTGCTGCTCGTCGGAGGTGCCTCTGATCGAGAATATTCTGAAAGGTCTGGATGGAATCAAGGAGGTTTCCGTCGTCGTGCCTTCGAGAACCGTCATTGTCGTTCATGACACACTACTCATCTCGCAAGCTCAAATTGTTAAGGCTCTGAATCAAGCAAGATTAGAGGCAAATATCAGAGTGGATGGGGACGTAGGACACCAAAAGAGATTATTGCCAAGTCCATATGCAATTGCCTCTGGCCTATtgcttttgctttcttttttaaAGTATGTGTACCACCCTTTGGTCTATCTGGCTCTTGGATCAGTAGCTGCTGGTGCTTTTCCTATTGTCCTGAAAGCCATAGCCTCAATTCGGAATTTCAGGTTTGATATCAACATTCTCGTCATCATTGCAGAGGCCAaggataaatttaaatttttatttttattgatagtTATTGGGACGATTGCTTTGAATGATTATTTGGAAGCCGGCACCATTGTTTTCCTCTTCTCAATTGCAGAATGGCTAGAGTCAAGGGCAAGCCACAAGGCGAGTGCAGCGATGTCATCGCTGATGAACATAGCCCCTCAGAAAGCAGTCATATCTGAGACAGGAGAAGTGGTGGACGTTGATGAGGTGAAAGTGAGCACCATCATTGCCGTTAAAGCAGGCGAAGTGATACCCATTGATGGAATTGTTGTAGAAGGAAACTGTGAAGTCGATGAGAAGACATTGACTGGGGAGTCCTTCCCAGTACCCAAACAAAAGGACTCTACTGTGTGGGCTGGCACCATCAATCTAAATGGTTATATTGATGTTAAAACTACTGCACTGTCTGAGGATTGTGTGGTGGCTAAAATGGCAAAGCTTGTAGAAGAAGCTCAAAACAGTAAAACCAGCACTCAGAGATTGATTGACAAGTTCGCCAAGTTTTACACCCCAGCTGTTGTAGTCATATCAAGTCTTCTAGCGGTGATTCCACTTGTGTTAAGAGTACATAATCAGAAACATTGGTTTCACTTCGCATTGGTTGTTTTAGTAAGTGCATGTCCATGTGCACTTGTTCTTTCCACACCAGTTGCAACCTTTTGTGCTTATACAAAAGCAGCCACATCTGGTCTTCTCATCAAAGGGGGTGATTATCTTGAAACCCTTGCAAAAATCAAGGTCATGGCTTTTGACAAAACGGGTACCATAACAAAGGGTGAATTTGTCCTGACAAATTTCCAGTCTCTTTGTGATGACATTGATCTGAACACTTTGTTATACTGGGTGACAAGCATTGAAAGCAAGTCAAGCCATCCGATGGCAGCAGCAATTGTGGACTATGGAAGGTCACTCTCCATTGAACCAAAGCCAGAAAAGGTGTCAGAGTTTGAAAACTTTCCTGGAGAGGGAATTCATGGAAAAATTGATGACAGAGATGTTTATATTGGAAATAGAAAAATCGTCTCAAGAGCTGGATCTGAAACAGTTCCCACCTTACAAGGTGATACACTGATAGGAAAAACTACTGGCTACATATACTCTGGAGCGACTCCCATTggaattttctctctctcagaCACTTGCCGATCTGGGGCTCGGGATGCAATAGGGCAGCTGAAGTTATTGGGCATCAAAACTTGTATGCTCACTGGGGATAATCAAGCAGCAGCTATGCAAGCACAAGAGCAGCTTGGGCATGTTTTGGAGCTAGTCCATGCAGAACTTTTACCCGAAGACAAAGTAAAAATCATCACAGAATTCAAGATGCAAGGACCAACAGCCATGGTTGGAGATGGTGTAAATGATGCGCCTGCATTAGCTACAGCTAACATTGGCATCTCAATGGGTATTTCAGGTTCTGCTCTAGCAAGCGAGACGGGTAATATAATTCTTATGTCAAATGACCTCAGGAAGATACCACAAGCCATCAAGCTCGCGAGAAGATCTCACAGGAAAGTAATAGAAAATATTATCTTGTCAGTCATCACTAAGGCCGCGATTATTGGCTTGGCCTTGGCTGGTCATCCACTTGTTTGGGCAGCAGTTCTTGCTGATGTTGGAACATGCTTGTTGGTGATCCTAAACAGCATGCTACTTTTGCATAAAGGACACAAGCATAAAGGAAAATGTTGTAAAACCTCCACTCATCTACATGTCCATAAAAATGGATGTAATGCCACTCATGACAAGtcctctcatcatcatcatcatcatcatgaacaTGAACATGAACATCAGCATCATAGCCATCATCATTATTGCTCGGACAATACGAAAAAAATATCTCAGCCTCAGAAATGCACCTCCCCCACAAGTGCCTCAAAGTGCCAGTCTAGCCATTCGAACTCAAGCTTTTGTGGACATTCTAAGCATGCCAAAACCACAGAGACTCATGTTCATTGTAAAGGCAATGCTGAATCTCATGAACCAAAACACTCTCATCATGGAAGATGTGACAAGAGTCAAGATGAAGCTCATTTGCATGATACGAAAAGCCAGTGTTGTTCAGGTTCTCACAATTTGGTTCTGACTACCAAAGAACATTACAATTCCCATGAAACAGTAGACTGCCACAACCGCCCGGGAAATCACGGTAGTCCATCGCCTAGTTCTCCTTGCCATCTCAATCCTTCTGCTCCACAAGATTGCCACTTGATCCCATGTTGTGAAACTACTGAGAGCCACAATATTCAGCATCAAAACACAGAGCCTCATTCTGATCAAGAAGATCACATATGTGTTGACATTGATAATGCGCATCTCCAATCAGCCTCAAGCCCATCACGTGTAACtttggaagagaaagaaaaagggtcCCTTTGCGAAGGATGTTCAGAAAACAACAAAAACTCCCCTGTTGTGTGTGGTTGTGTGAGATCAAACGAGAATGAAGTAGGTgcatgttgcacaagtgagagcTCTTCAAAGGAATCCACAGAACTCTGTCTTATGCATGCTTGCCTTAGTTTAGACAAAAGACAGAATGGTGCATGTTGCAAGAGCTACATGAAGGAATGCTGTAGCAAGCACGGACATTTAGGCACTAATTTTCGAGTTGGCTTATCGGAGATTATTACTGATTAG 3135 0.4166 MAADHEVKNKAAARKFEKSYFDVVGLCCSSEVPLIENILKGLDGIKEVSVVVPSRTVIVVHDTLLISQAQIVKALNQARLEANIRVDGDVGHQKRLLPSPYAIASGLLLLLSFLKYVYHPLVYLALGSVAAGAFPIVLKAIASIRNFRFDINILVIIAEAKDKFKFLFLLIVIGTIALNDYLEAGTIVFLFSIAEWLESRASHKASAAMSSLMNIAPQKAVISETGEVVDVDEVKVSTIIAVKAGEVIPIDGIVVEGNCEVDEKTLTGESFPVPKQKDSTVWAGTINLNGYIDVKTTALSEDCVVAKMAKLVEEAQNSKTSTQRLIDKFAKFYTPAVVVISSLLAVIPLVLRVHNQKHWFHFALVVLVSACPCALVLSTPVATFCAYTKAATSGLLIKGGDYLETLAKIKVMAFDKTGTITKGEFVLTNFQSLCDDIDLNTLLYWVTSIESKSSHPMAAAIVDYGRSLSIEPKPEKVSEFENFPGEGIHGKIDDRDVYIGNRKIVSRAGSETVPTLQGDTLIGKTTGYIYSGATPIGIFSLSDTCRSGARDAIGQLKLLGIKTCMLTGDNQAAAMQAQEQLGHVLELVHAELLPEDKVKIITEFKMQGPTAMVGDGVNDAPALATANIGISMGISGSALASETGNIILMSNDLRKIPQAIKLARRSHRKVIENIILSVITKAAIIGLALAGHPLVWAAVLADVGTCLLVILNSMLLLHKGHKHKGKCCKTSTHLHVHKNGCNATHDKSSHHHHHHHEHEHEHQHHSHHHYCSDNTKKISQPQKCTSPTSASKCQSSHSNSSFCGHSKHAKTTETHVHCKGNAESHEPKHSHHGRCDKSQDEAHLHDTKSQCCSGSHNLVLTTKEHYNSHETVDCHNRPGNHGSPSPSSPCHLNPSAPQDCHLIPCCETTESHNIQHQNTEPHSDQEDHICVDIDNAHLQSASSPSRVTLEEKEKGSLCEGCSENNKNSPVVCGCVRSNENEVGACCTSESSSKESTELCLMHACLSLDKRQNGACCKSYMKECCSKHGHLGTNFRVGLSEIITD 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1372 1044 MobiDBLite consensus disorder prediction 747 763 - -
Sto12g1372 1044 Gene3D - 424 545 IPR023299 GO:0000166
Sto12g1372 1044 ProSiteProfiles Heavy-metal-associated domain profile. 18 84 IPR006121 GO:0046872
Sto12g1372 1044 ProSitePatterns E1-E2 ATPases phosphorylation site. 415 421 IPR018303 -
Sto12g1372 1044 Pfam haloacid dehalogenase-like hydrolase 409 627 - -
Sto12g1372 1044 SFLD p-type atpase 396 665 IPR044492 -
Sto12g1372 1044 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 8 733 - -
Sto12g1372 1044 Gene3D - 404 664 IPR023214 -
Sto12g1372 1044 PRINTS P-type cation-transporting ATPase superfamily signature 262 276 - -
Sto12g1372 1044 PRINTS P-type cation-transporting ATPase superfamily signature 413 427 - -
Sto12g1372 1044 PRINTS P-type cation-transporting ATPase superfamily signature 537 548 - -
Sto12g1372 1044 PRINTS P-type cation-transporting ATPase superfamily signature 559 569 - -
Sto12g1372 1044 PRINTS P-type cation-transporting ATPase superfamily signature 613 632 - -
Sto12g1372 1044 PRINTS P-type cation-transporting ATPase superfamily signature 637 649 - -
Sto12g1372 1044 SFLD Haloacid Dehalogenase 396 665 - -
Sto12g1372 1044 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 166 716 IPR027256 GO:0006812|GO:0016021|GO:0019829
Sto12g1372 1044 PRINTS Copper-transporting ATPase signature 204 222 - -
Sto12g1372 1044 PRINTS Copper-transporting ATPase signature 335 349 - -
Sto12g1372 1044 PRINTS Copper-transporting ATPase signature 591 608 - -
Sto12g1372 1044 PRINTS Copper-transporting ATPase signature 648 662 - -
Sto12g1372 1044 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 8 733 - -
Sto12g1372 1044 SUPERFAMILY HMA, heavy metal-associated domain 15 83 IPR036163 GO:0046872
Sto12g1372 1044 SUPERFAMILY HAD-like 412 714 IPR036412 -
Sto12g1372 1044 SUPERFAMILY Calcium ATPase, transmembrane domain M 156 685 IPR023298 -
Sto12g1372 1044 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 187 690 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto12g1372 1044 MobiDBLite consensus disorder prediction 871 890 - -
Sto12g1372 1044 CDD P-type_ATPase_HM 102 715 - -
Sto12g1372 1044 Pfam E1-E2 ATPase 223 391 - -
Sto12g1372 1044 CDD HMA 21 82 IPR006121 GO:0046872
Sto12g1372 1044 Gene3D - 13 86 - -
Sto12g1372 1044 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 166 506 - -
Sto12g1372 1044 Gene3D - 201 316 - -
Sto12g1372 1044 MobiDBLite consensus disorder prediction 820 840 - -
Sto12g1372 1044 SUPERFAMILY Calcium ATPase, transduction domain A 226 312 IPR008250 -
Sto12g1372 1044 MobiDBLite consensus disorder prediction 741 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1372 Sto-Chr12 9166301 9178351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1372 12 878 Primary Pumps ATPases AT4G30110 60.158 0.0 1044
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1372 K01534 - gmx:100817567 1300.42