Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1349 ATGGACTTTTATTATTCTCCACCGTCCCACACTTCATCATTCGATGATTCCTTCGATAAATTCAGTGGTGACGTTGGTTCCACAATGAAATGGGCCGTCGTTGGCTCTATAGTTTCTTTTGTGGTGATGATAATTGCCATTGTGGCAATAGCATACGCCATTATTGAGTGCTTGAAGAAAGCAGGAACAATGATTCCATCCTACACTCAGATTCCAACCACCGACAACCTTAAAGCTTCAAACAATGAAAATATTGCCATATCAATACCACCAGATTCATCACAAGTGGAGTTTGCAACTATGGAAAGATTCCTCAACAACATCACTAGAGAGAAACCCATAAGATACTCACCCACAGAACTAGAAGAAATCACACATAACTACTCAACCATCCTGGGTGCTGGTGCTTTTGGGGTGGTCTATAAAGGGAAATTATCCCCTGAAGAGCATGTAGCAGTAAAAATTCTCAACAATTTTGATATGGGAATGGAAGAGCAATTCAAGGCAGAGGTTAGCACAATAGGAAGAACTTACCATATCAATCTGGTTAGACTTTTTGGCTTTTGCTTCCACACTGACAAAATTGCCCTTATTTATGAGTATGTACAAAATGGGTCCCTCAACAATTTCTTGTTTGGTAGTAACAACAGAGAAATTGAGTTATTGAAGCTCCATGAAATTGCAATAGGAACAGCAAAAGGAATAGCCTATTTACATGAAGAATGCCAGCATAGAATCATCCATTATGACATTAAGCCAGAGAATATACTTCTAGATATGAACTTAGAGCCAAAAGTAGCAGATTTTGGCCTTGCAAGGCTTTGTAATAGAGAAATCAGCCATGTGAATATGACACATTTCAGAGGAACTAGAGGCTATGCTGCACCAGAATTGTGGAAACTTTGTCCTGTGACCCATAAGTGTGATGTGTATAGTTTTGGGATTCTTCTGTTTGAAATTGTGGGGAGAAGGAGGCATTTTGATGGGAGTTATAGTGAGTCAAAACAGTGGTTTCCAAAATGGGCATGGGATATGTTTGAGAATGGTGAAATGGGAGTGATGGTTTCACTGTGTGGAATTGAAGAGAAAGATAGGGAAATGGCTGAGAGGATGTTGATGGTGGCTTTGTGGTGTGTTCAGTTTGAACCAGGTGATAGGCCTCTTATGAGTAATGTGGTGAAGATGCTGGAGGGTGATATGGGAATTTCTCCACCTCCATTTCCTTTTCAGAATTTGGTTTCTGGTAAATTGAATCTGAGTCCAATGGGAAATGACCATGGTTTAGATGATTCTTCATCATGGGGGACAGAATCTTCTGATCAGTCTAAGCATCCAAAGCTCCGGCGCGGCGTAACCAGGCGTCCCTCTCCCTCCGGTCATAGTTATGTGAGTGTTCTCCCTGTTACAGAGCTTGGCCAGACCGAAATCCGATACCTTGGGGCACAAGTTATCGTCCAGGAGGATGTTGCTCGGTTTTATGTCGTAGTGGATGATCCGCTGCTGGCATTCCTCGTGCAGGTACGCGATCCCTCTCGCGGTCCCCACCGCGATCTCGTGGAGCTTCTCGAATCCCAAGGCGGTCCCCTCGCCATCGGGTTCGCCGCGGTGGTACAGATAATTGTCCAGCGATCCGTTTCTCATGTACTCGTAAACAAGTGCCCTCGTGTGATTCTCGAAGCAGAATCCGGTGAGGCGGACGAGATTGAAGTGATGGACTCTCCCGATTGTGCTCACTTCCGCGATGAATTGCTCCTCCACTCTCCTATCGTCGGAACTCTTATTCAAAACCTTCACCGCGACGACGGTCTCGTCGGCGTCGCCACCGAAAACCCCTTTGTACACCGTTCCGAAACCTCCCGACCCTAA 1866 0.4475 MDFYYSPPSHTSSFDDSFDKFSGDVGSTMKWAVVGSIVSFVVMIIAIVAIAYAIIECLKKAGTMIPSYTQIPTTDNLKASNNENIAISIPPDSSQVEFATMERFLNNITREKPIRYSPTELEEITHNYSTILGAGAFGVVYKGKLSPEEHVAVKILNNFDMGMEEQFKAEVSTIGRTYHINLVRLFGFCFHTDKIALIYEYVQNGSLNNFLFGSNNREIELLKLHEIAIGTAKGIAYLHEECQHRIIHYDIKPENILLDMNLEPKVADFGLARLCNREISHVNMTHFRGTRGYAAPELWKLCPVTHKCDVYSFGILLFEIVGRRRHFDGSYSESKQWFPKWAWDMFENGEMGVMVSLCGIEEKDREMAERMLMVALWCVQFEPGDRPLMSNVVKMLEGDMGISPPPFPFQNLVSGKLNLSPMGNDHGLDDSSSWGTESSDQSKHPKLRRGVTRRPSPSGHSYVSVLPVTELGQTEIRYLGAQVIVQEDVARFYVVVDDPLLAFLVQVRDPSRGPHRDLVELLESQGGPLAIGFAAVVQIIVQRSVSHVLVNKCPRVILEAESGEADEIEVMDSPDCAHFRDELLLHSPIVGTLIQNLHRDDGLVGVATENPFVHRSETSRP 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1349 621 Gene3D Transferase(Phosphotransferase) domain 1 202 401 - -
Sto12g1349 621 ProSiteProfiles Protein kinase domain profile. 126 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1349 621 PANTHER RUST RESISTANCE KINASE LR10-RELATED 34 420 IPR045874 GO:0004672
Sto12g1349 621 SUPERFAMILY Protein kinase-like (PK-like) 108 397 IPR011009 -
Sto12g1349 621 MobiDBLite consensus disorder prediction 425 440 - -
Sto12g1349 621 MobiDBLite consensus disorder prediction 420 460 - -
Sto12g1349 621 Gene3D Phosphorylase Kinase; domain 1 99 201 - -
Sto12g1349 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Sto12g1349 621 PANTHER OSJNBB0022F16.11 PROTEIN 34 420 - -
Sto12g1349 621 SMART serkin_6 126 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1349 621 ProSitePatterns Protein kinases ATP-binding region signature. 132 154 IPR017441 GO:0005524
Sto12g1349 621 Pfam Protein kinase domain 130 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1349 Sto-Chr12 8895775 8899696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1349 115 409 Receptor kinase-like Gene Family AT5G38280 42.384 1.30e-79 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Sto12g1349 Pkinase 6.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1349 - - gmx:100820269 578.941