Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1343 ATGAGACCCATTCCGCTGTCCCTTTCTCTCTTTGTCATGCCTGATCGATGCTGTACAATACTAGATGCGGAGgtaccCGGAGACATCATAAGCGTCAAACTAGGAGATATCATTCCGGCTGATGCCCGTCTTCTCGATGGTGATCCGTTGAAGGTTGATCAATCTGCTCTTACAAGGAATTTATTTTAA 189 0.4392 MRPIPLSLSLFVMPDRCCTILDAEVPGDIISVKLGDIIPADARLLDGDPLKVDQSALTRNLF 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1343 62 PANTHER CALCIUM-TRANSPORTING ATPASE 25 59 - -
Sto12g1343 62 Coils Coil 62 62 - -
Sto12g1343 62 Gene3D - 25 58 - -
Sto12g1343 62 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 25 59 - -
Sto12g1343 62 Pfam E1-E2 ATPase 25 58 - -
Sto12g1343 62 SUPERFAMILY Calcium ATPase, transduction domain A 25 58 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1343 Sto-Chr12 8854233 8855802 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1343 25 58 Primary Pumps ATPases AT5G57350 91.176 8.24e-17 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1343 K01535 - ppp:112286501 70.4774