Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1341 ATGAGAGCTTGGAGGTTCTTCCACTCCCACACCAATCTCCTCACACACCCACTTGGAAATGCTTCTCCTTTGAAGAACTCTTCGATGCCACCAATGGCTTCGCCTCAGGTGATGAATCCCGGATTTCCCCACTCCTTTGCTTCTTTGTTTGTTTCTGATTCTGGGTATCTCAAAGGTGGCATCTTTTTCTGTGTTTTGTCAGAGAATCTGGTCGGAAAAGGAGGGTACGCGGAGGTTTATAAGGGGACATTGAAGGATGGAGACGAGATTGCTGTGAAAAGGCTTACGAGAACTTCGAGCGATgagaggaaggagaaggagtTCTTGACGGAGATTGGCACAATCGGTCATGTTCATCATCCTAATGTCTTGCCTCTTCGAGGTTGTTGTATTGATAAGGGTCTCTACCTCGTCTTCCAGCTTTCCTCTAAAGGCTCTGTCGCTTCCCTTCTTCATGATCAAAGCTTGCCACCTATGGATTGGAAAACCAGGCACAAGATTGTTCTTGGAACAGCACGTGGCCTTCACTACTTGCACAAAGGATCAAAATGGCTCCCAAACCAATGGACCCATCATTCAATTGCTCCGATAGAAGGCACATTTGGGCATTTGGCACCAGAGTACTATTTACATGGAATAGTGGATGAGAAGACAGATGTGTTTGCTTTTGGAGTGTTCATGCTTGAAGTAATCTCAGGGAGGAAGCCAGTGGATGGGAAAGTTAATACTACATTTGGTTTGTTTGGTTTCTTTTCTTGTAGAGTTAGGCTAGGCAAAACCATTATTGAAGAAGGAGGAGATAGAGAAGGTGGTAGATGGAAGGCTTGA 828 0.442 MRAWRFFHSHTNLLTHPLGNASPLKNSSMPPMASPQVMNPGFPHSFASLFVSDSGYLKGGIFFCVLSENLVGKGGYAEVYKGTLKDGDEIAVKRLTRTSSDERKEKEFLTEIGTIGHVHHPNVLPLRGCCIDKGLYLVFQLSSKGSVASLLHDQSLPPMDWKTRHKIVLGTARGLHYLHKGSKWLPNQWTHHSIAPIEGTFGHLAPEYYLHGIVDEKTDVFAFGVFMLEVISGRKPVDGKVNTTFGLFGFFSCRVRLGKTIIEEGGDREGGRWKA 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1341 275 PANTHER OS08G0249100 PROTEIN 182 241 - -
Sto12g1341 275 PANTHER OS08G0249100 PROTEIN 66 182 - -
Sto12g1341 275 ProSiteProfiles Protein kinase domain profile. 65 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1341 275 Gene3D Transferase(Phosphotransferase) domain 1 65 183 - -
Sto12g1341 275 Pfam Protein tyrosine and serine/threonine kinase 69 180 IPR001245 GO:0004672|GO:0006468
Sto12g1341 275 ProSitePatterns Protein kinases ATP-binding region signature. 71 93 IPR017441 GO:0005524
Sto12g1341 275 SUPERFAMILY Protein kinase-like (PK-like) 68 240 IPR011009 -
Sto12g1341 275 PANTHER OS04G0654600 PROTEIN 66 182 - -
Sto12g1341 275 PANTHER OS04G0654600 PROTEIN 182 241 - -
Sto12g1341 275 Gene3D Transferase(Phosphotransferase) domain 1 184 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1341 Sto-Chr12 8821613 8823736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1341 67 274 Receptor kinase-like Gene Family AT1G53420 34.855 5.73e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Sto12g1341 PK_Tyr_Ser-Thr 5.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1341 - - gmx:100305398 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1120 3 7928251 7931590 Sto12g1341 12 8821613 8823736 CCT