Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1340 ATGGGGTTTGAAGATGTGATTGCAACATCCTCAAGTACTAATAATAACACCACCAATATTATTCCACATAGTGATGATCCTCAAATaattgatgataataataatattaacccaaaggatgatgaagatgaagaaggcaAATTAGGGTTTTTGATGAGAAGGCAAAGCCATAAAAACAAGAGCAAgtctaagaagaagaagagaaatagcAGGAAGAAATTACAAGATCATCATCATAAGGCTATTACTtcagaagaagatgaagagtttGAGGAATGTGTGAAAGTGGTTGAATGGCTAGAGTGTGAAGGACATATGGAGAAGAGTTTCAAGCAGAAATTTGTGAATTGGTTAAAGATGAAAGCAAGGGCTCATGAAGTAAAAATTGTCAAAGTTTACATTAATACTTTTCATGATGATCCAGTCTCTCTTGCTGAGCAGCTTGTGCATACTTTTTCAGAATTTATTACATCTTGCAAGAGAAAAAGAGTTGTGCCTGCTGAGTTGTTACTCTCAGTTGGGTTGAAAAGGACTATGCCTCTTCCAACTCTATGA 555 0.2991 MGFEDVIATSSSTNNNTTNIIPHSDDPQIIDDNNNINPKDDEDEEGKLGFLMRRQSHKNKSKSKKKKRNSRKKLQDHHHKAITSEEDEEFEECVKVVEWLECEGHMEKSFKQKFVNWLKMKARAHEVKIVKVYINTFHDDPVSLAEQLVHTFSEFITSCKRKRVVPAELLLSVGLKRTMPLPTL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1340 184 MobiDBLite consensus disorder prediction 53 77 - -
Sto12g1340 184 MobiDBLite consensus disorder prediction 1 83 - -
Sto12g1340 184 PANTHER VIN3-LIKE PROTEIN 2-RELATED 27 168 - -
Sto12g1340 184 PANTHER VIN3-LIKE PROTEIN 2-RELATED 27 168 IPR044514 GO:0010048|GO:0040029
Sto12g1340 184 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1340 Sto-Chr12 8809095 8810574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1340 31 158 PHD Gene Family AT3G24440 31.061 5.33e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1340 - - minc:123194740 109.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1340 12 8809095 8810574 Sto12g1340 12 8809095 8810574 ECH