Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1325 ATGGGTCGAGCTCCATGCTGTGACAAAGCCAACGTGAAGAGAGGACCTTGGTCTCCAGAAGAAGATGCCATACTCAAAGCTTACATCCAAAATCATGGAACTGGAGGCAACTGGATTGCTCTTCCTCAAAAAATTGGGCAAAATAAACACGAGCTTCACGGTgcaattcaacaagaagttgtAAAGATCACCGGCTCGCCGCAGCCGTCGGAAGGCTTAGCTCCGATCACTGGCATCCAGACTAATCAGGTCGAGGATCGATTTGATATGGGAATTCATGATGATCAGGTTTCTGCACTACAAGGTGAGCTTGACAACAtcctcaacaacaacaacaacaacaacaacaataataacaaaTCAAGAATTATTATGAGTGATTACATGGCACAGCAAGAACATAGAGTTGAATATGAATATGATTGTTTTGGAGAGATTAATGTTGTTGGTTCCTCAAAGGACAGCTTGATGTGGTGGTCCAATGATTTTGATGCCAAGTCAGCATCCTCAAGCTCATGGGATTCAACCACAACTGCTcctcatcatgttcttcactcAGATCAGGAGAAAATGTTTCAAGATTATGAGGGATTAGGTTATATTTTGTGA 609 0.376 MGRAPCCDKANVKRGPWSPEEDAILKAYIQNHGTGGNWIALPQKIGQNKHELHGAIQQEVVKITGSPQPSEGLAPITGIQTNQVEDRFDMGIHDDQVSALQGELDNILNNNNNNNNNNNKSRIIMSDYMAQQEHRVEYEYDCFGEINVVGSSKDSLMWWSNDFDAKSASSSSWDSTTTAPHHVLHSDQEKMFQDYEGLGYIL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1325 202 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 35 IPR017930 -
Sto12g1325 202 SUPERFAMILY Homeodomain-like 8 46 IPR009057 -
Sto12g1325 202 CDD SANT 16 40 IPR001005 -
Sto12g1325 202 PANTHER OS09G0431300 PROTEIN 1 48 - -
Sto12g1325 202 Gene3D - 7 87 - -
Sto12g1325 202 PANTHER OS09G0431300 PROTEIN 1 48 - -
Sto12g1325 202 Coils Coil 97 117 - -
Sto12g1325 202 ProSiteProfiles Myb-like domain profile. 9 49 IPR001005 -
Sto12g1325 202 Pfam Myb-like DNA-binding domain 14 49 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1325 Sto-Chr12 8708715 8710601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1325 1 46 MYB Transcription Factor Family AT3G49690 89.130 7.10e-25 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto12g1325 Myb_DNA-binding 1.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1325 K09422 - pop:7465552 100.523