Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1324 ATGTCAAAAAACACAGCCACAAAATTTAATGCATATGGAGAAGATGATGCATATACCAGGATGTTTGAAGAATTATGTTCAATGGATCTTTCATATATCCCATATCCCTTGCAAGCTCAAGATAGAGAAGTAAGAGgaaaacaaaaaattatatctcTCTCATGTGATATTAGTAATCAGGAAACACTACTACACATTATGCACTTATTCAAAATGAATAAATCTACTAAGTATGATCAACCATGTTGTAAGCTGAAAAATATAATTAGTGTAATCAAGCTTACTTACAAACTTAATACTaaagaaaaagaaATGCGGGTTAAAATTAGGGGGAAGAACTTCACAACCACCCCAGTCTCGCGAATACTTCAAGAAAAACAAGACTGGAAGAAGCTTGAAGGAGCAGAggatgaagagaagagaagggaaaAGAGTGCCACGTGGGACACTACATGGCAACCAGGCATCGCATCTTGGAGCGCCCCAGAAGCCACTATCGCCTATGGCGGTATCATCGAATTTCCCAATTTCAGGTACCACCATCTTACTGCAATCCGAACTTCTACACCTGGTTCTGCACCGTGGAGCTATATGATGGGGCAGCACCCTGCATATTATTCCCCCAGGCATCATGGCCACCATGACTCAAGATCGTTGGTAGAATTTCCAACTTCTCCGTCTTCTACAAGGTATCAGATGCCATTTGCAGAATTACCAGATAAGTGTCTTGATAGAATGCCAGAAGAATATGCTCGGCATCAGGTAAATCATCATCCGCTGTATGACAATCAACCACAATATTCTGATAATGTTATGTGGTTTCCAACTGGAGCTGCATCCAGTGAGAAGGCAGGTTTTCCAGGCAATATTATTCCTGGTTCCCACGCTCTTGATGGGAACAATACTTGTGAGCACTGCCGGATAAGTTATCAGAGAGGTCAGTCACATTTTGATCATCCTAGTATTAGTAATGGACTTCCACCGGCTGTTAATCAATGTTCAGAATGCCACTCAAACAGGGATACTTTCATGATGAATGCTGATGCAAAGTTGCATCCTGTCATTTATCCCAATGAGGCAAATAATGATAACAGATCTCCCTTTAATGATACACAAAATCATGAGAGAGGATGGATGTTGCAGCATCAAACAAATAATCGGGTTGAGGAAGCAAGAGGCCCTGTCTCTGGATCTGTAAGGTTGAATGATCATTATGTTGTTGATGGTCCTGCCATAAATTACTCTCTTGGGCATGGTAGTGTGGCTGATGGACATCATATGTCTTTGAATTACGTTCACCAACGAGCTGGACCTGAATTGGGACCTGAACTGTTTCATGACCAAGCCGTGGCTACTACACCCCATCTACAAATTCCTCCTTTGGAAGAGCGCAGTGTGCGGTATGGGAACCCACCTCCTTATGGAGTAGATAATCATTATTCTGTAGCTCGTGGACATGCACCTGGGCCTCCTTTCTGGAGAAACACTCCAGCTCAGCTTCACATAGGACCATCTTATGAGGGATCTAGTCCGCCTAGGCAGGTAAATGGTGTGGTAAATGCAGGATTAAGGGGAGAGGGTAGTCCAAGAGTTTACATTGGGCCAGATAGTCAAAATCATTGGATTGATTCCACACACAAATTGTCAGGTCATGATGGTTCGTCCATCCTAGAATATCCTTATGCTCATGCACTGAAATTCAACCCAAAGGCTCTTGGTCAAGAAAATCAACACCCAGTTACTGTAGATGCCGTTCATTGCCCACAGGACATGAATCCTGGCATTCACTTGGAACCAGTGCAGATACCTAAATCATCTTTTACTACAGTTCACAACAAAGATATTTTAAAGAATGGGACTGATATGACTGAAGCAATGGGGTTGCAATCTCAAAATTTTCCTAGAGAAGAAAAGGAGGCAGAAAATGTGCATAAGGTTGAGAACACCAATGCTCAGAGTATATCTTTTTCTGAGCAAAATAAAATTGCTGAGAATAGTGAAGCTGCTACTCCTATTGAGTCTAATAATTCAAAATCAAAACCTGTAGCTGACTGTAGTAATGCTGTGAAACTGGTTGATGGGGAATTATCTGCTCCTGAAGATTCCAAGGTTAACCAATTCAGTTTTTTGCCAGAGTTGATTGCTTCTGTGAAAAAGGCTGCTTTGGAAGGTGCTGAAGAGGTGAAAGCTAGAGCTGAGGAGCACACTGCTTCTCAGGTTTGCAGGTCAGCAACCAAAGATGACACAGCAAATGAAGGAGAGACAGCGAATGCTCATGGTGATTTAGAATTGGACTCTGACAATGACAATGTAGATACCTCTAAAATTGAGCCTACTAAAGCTGAGGCAGAAGCTATTGCAAGGGGATTGCAGACAATTAAAAATGATGATTTGGAAGAGATCCGAGAACTAGGTTCTGGAACTTATGGGTCTGTTTATCATGGGAAATGGAAAGGTTCTGATGTTGCAATTAAGAGGATTAAAGCTAGCTGTTTTGCTGGAAGACCATCAGAAAGAGAAAGACTGATTGCGGATTTCTGGAAAGAGGCATTGATACTCAGTTCATTACATCACCCAAATGTTGTCTCCTTCTATGGTATTGTCCGTGATGGCCCTGATGGTTCTTTAGCAACTGTGACTGAATTCATGATTAATGGATCCCTGAAGCAGTTCTTGCATAAGAAAGATAGAACTATAGATCGTCGAAAGAGGCTCATTATAGCTATGGATGCGGCTTTTGGGATGGAGTATTTGCATGGAAAGAACATTGTGCATTTTGATTTGAAATGTGAAAATCTTTTAGTTAATATGAGAGATCCGCAGCGGCCTGTCTGCAAGATTGGTGATTTGGGTTTATCAAAGGTAAAACAGCACACCCTAGTGTCAGGAGGGGTGCGAGGAACTTTGCCATGGATGGCACCCGAGCTCCTAAGTGGGAAAAGCAATATGGTGTCAGAGAAGATTGATGTTTATTCTTTCGGGATTGTCATGTGGGAATTGCTCACTGGGGATGAACCCTATGCTGATATGCATTGTGCTTCAATAATAGGTGGCATCGTGAACAACACGTTACGACCTCAAAGCCCATCATGGTGTGATCCTGAGTGGAAGTCTCTAATGGAAAGTTGTTGGGCTTCTGATCCTACAGAGAGGCCATCATTCTCAGAAATCTCAAAGAAGCTGAGGACTATGGCTGCGCCAATGAATGTGAAATAG 3216 0.4157 MSKNTATKFNAYGEDDAYTRMFEELCSMDLSYIPYPLQAQDREVRGKQKIISLSCDISNQETLLHIMHLFKMNKSTKYDQPCCKLKNIISVIKLTYKLNTKEKEMRVKIRGKNFTTTPVSRILQEKQDWKKLEGAEDEEKRREKSATWDTTWQPGIASWSAPEATIAYGGIIEFPNFRYHHLTAIRTSTPGSAPWSYMMGQHPAYYSPRHHGHHDSRSLVEFPTSPSSTRYQMPFAELPDKCLDRMPEEYARHQVNHHPLYDNQPQYSDNVMWFPTGAASSEKAGFPGNIIPGSHALDGNNTCEHCRISYQRGQSHFDHPSISNGLPPAVNQCSECHSNRDTFMMNADAKLHPVIYPNEANNDNRSPFNDTQNHERGWMLQHQTNNRVEEARGPVSGSVRLNDHYVVDGPAINYSLGHGSVADGHHMSLNYVHQRAGPELGPELFHDQAVATTPHLQIPPLEERSVRYGNPPPYGVDNHYSVARGHAPGPPFWRNTPAQLHIGPSYEGSSPPRQVNGVVNAGLRGEGSPRVYIGPDSQNHWIDSTHKLSGHDGSSILEYPYAHALKFNPKALGQENQHPVTVDAVHCPQDMNPGIHLEPVQIPKSSFTTVHNKDILKNGTDMTEAMGLQSQNFPREEKEAENVHKVENTNAQSISFSEQNKIAENSEAATPIESNNSKSKPVADCSNAVKLVDGELSAPEDSKVNQFSFLPELIASVKKAALEGAEEVKARAEEHTASQVCRSATKDDTANEGETANAHGDLELDSDNDNVDTSKIEPTKAEAEAIARGLQTIKNDDLEEIRELGSGTYGSVYHGKWKGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMINGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTLRPQSPSWCDPEWKSLMESCWASDPTERPSFSEISKKLRTMAAPMNVK 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1324 1071 CDD STKc_MAP3K-like 804 1061 - -
Sto12g1324 1071 PRINTS Tyrosine kinase catalytic domain signature 880 893 IPR001245 GO:0004672|GO:0006468
Sto12g1324 1071 PRINTS Tyrosine kinase catalytic domain signature 917 935 IPR001245 GO:0004672|GO:0006468
Sto12g1324 1071 PRINTS Tyrosine kinase catalytic domain signature 988 1010 IPR001245 GO:0004672|GO:0006468
Sto12g1324 1071 PRINTS Tyrosine kinase catalytic domain signature 1032 1054 IPR001245 GO:0004672|GO:0006468
Sto12g1324 1071 ProSitePatterns Protein kinases ATP-binding region signature. 804 825 IPR017441 GO:0005524
Sto12g1324 1071 SMART serkin_6 798 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1324 1071 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 23 1071 - -
Sto12g1324 1071 SUPERFAMILY Protein kinase-like (PK-like) 790 1059 IPR011009 -
Sto12g1324 1071 ProSiteProfiles Protein kinase domain profile. 798 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1324 1071 MobiDBLite consensus disorder prediction 747 772 - -
Sto12g1324 1071 MobiDBLite consensus disorder prediction 736 772 - -
Sto12g1324 1071 Gene3D Transferase(Phosphotransferase) domain 1 884 1070 - -
Sto12g1324 1071 ProSitePatterns Serine/Threonine protein kinases active-site signature. 923 935 IPR008271 GO:0004672|GO:0006468
Sto12g1324 1071 Gene3D Phosphorylase Kinase; domain 1 783 883 - -
Sto12g1324 1071 PIRSF TyrPK_CSF1-R 25 102 - -
Sto12g1324 1071 PIRSF TyrPK_CSF1-R 795 911 - -
Sto12g1324 1071 PIRSF TyrPK_CSF1-R 903 1069 - -
Sto12g1324 1071 PANTHER - 23 1071 - -
Sto12g1324 1071 Pfam Protein tyrosine and serine/threonine kinase 799 1061 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1324 Sto-Chr12 8689590 8704022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1324 25 1071 MAP Kinase Kinase Kinase AT5G57610 47.723 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Sto12g1324 PK_Tyr_Ser-Thr 2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1324 - - gmx:100779077 1309.28