Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1303 ATGCTGATAACGGTTAGagaagcttcttcttcttcttccctctgCTTCACTCGTCTTCACTGCAAAACCTCTTCTTCCAGGTTCAGAAGATCCTTCTCCCGAGCTACCATCTCTCTACACAGAACACCCAACACTACCCACTCATGGAATCCGGGGCGTCTCTCTACCTGCTATGAGGGAGCAAATTTTGATCCCTTGGGTATTAACTCAGATTTATCATCTGCTCTGAATTCTTCTTGGGAAAATTTGGTATGCTTGTTTTCACAAACATTTGAGAGTGCTTCAAGTAGAGAAAAGGAAAAACCTAATTCTTCTCGAGGCGTTGCAGCTGCAATAGAGGATAGTTCAATTGATATTGGGGACTTCTTTAAAGGTCCTTTACCTGGAAAGTTTCTTAAGCTTTTAGGGCTACTTGCGTTGTCACGGCTCGGTGTATACATACCTCTGGGTGGGGTTAATAGGGATGCTTTTGTTGGAAATTTGGATCAGAACAGTTTATTAAGCACTTTGGACTCATTTTCTGGAGGAGGAATCGGTAGACTTGGAATATGCTCTCTTGGTATTGTTCCCTTCATCAATGCTCAGATTGTGTTCCAACTTCTTGCACAGATATATCCCAAGTTGCAAGATCTTCAGAAAAGGGAAGGTGAGTCGGGAAGAAAGAAAATTCTTCAGTACACTCGATATGCTTCAGTTGGATTCGCCGTCGTACAGGCAATTGGACAAGTACTCTACCTACGGCCTTATGTTAATGACTTTAGTACACAATGGGTTCTTTCTTCTGTCATCTTATTGACTCTTGGATCTGTATTTACAACATATATTGGAGAACGAATCACAGACCTAAAACTTGGGAATGGAACCTCTCTTTTGATATTCACAAACATTATCTCCTACTTGCCCGCCTCTTTTGGAAGGACATTTGCACAAGCATTTAATGATGCTAATTACGTTGGACTTGCCACTTTGATTGTGTCCTTCTTTCTGTTGGTTCTTGGTATTGTTTATGTTCAGGAAGCTGAGAGAAAGATTCCTCTTAACTATGCTTCAAGATACACTAGCAGAACCAGAGGACTTGATAAATCTGCTTACCTACCCTTTAAGGTAAATAGTTCTGGAGTGATGCCTATCATATTTTCTACATCATCCTTAGCTCTTCCTGGTACTTTGGCACGTTTCACTGGCATAAATGCACTAAAGAAGGCTGCGCTCTCTTTGAATCCTGGGGGTTCCTTTTATCTGCCAGTGAACATCCTTTTGATAGCATTCTTCAACTACTATTACACTTTCCTACAATTGGACCCTGATGATTTGAGTGAACAGTTGAAACGTCAAGGTGCATCAATTCCACTTGTCCGACCTGGGAAAACTACTGCCACCTTTATTAAAACAGTTCTTAGTCGAATATCAGTTCTTGGTTCGACATTTTTGGCAATTTTGGCTGCTGGACCCGCTGTTGTTGAGCAGATTACACACCTGACTGCATTTCGGGGATTTGCCGGAACTTCTATTCTTATTCTTGTTGGTTGTGCGACAGACACAGCTAGAAAAGTTCAAGCTGAGATCATATCCCAGAAGTACAAGAACATAGAGTTCTATGACTTTGACAAGTACTAA 1617 0.4063 MLITVREASSSSSLCFTRLHCKTSSSRFRRSFSRATISLHRTPNTTHSWNPGRLSTCYEGANFDPLGINSDLSSALNSSWENLVCLFSQTFESASSREKEKPNSSRGVAAAIEDSSIDIGDFFKGPLPGKFLKLLGLLALSRLGVYIPLGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQIYPKLQDLQKREGESGRKKILQYTRYASVGFAVVQAIGQVLYLRPYVNDFSTQWVLSSVILLTLGSVFTTYIGERITDLKLGNGTSLLIFTNIISYLPASFGRTFAQAFNDANYVGLATLIVSFFLLVLGIVYVQEAERKIPLNYASRYTSRTRGLDKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGINALKKAALSLNPGGSFYLPVNILLIAFFNYYYTFLQLDPDDLSEQLKRQGASIPLVRPGKTTATFIKTVLSRISVLGSTFLAILAAGPAVVEQITHLTAFRGFAGTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDKY 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1303 538 Gene3D SecY subunit domain 122 527 IPR023201 -
Sto12g1303 538 PRINTS Preprotein translocase SecY subunit signature 131 149 - -
Sto12g1303 538 PRINTS Preprotein translocase SecY subunit signature 181 201 - -
Sto12g1303 538 PRINTS Preprotein translocase SecY subunit signature 223 246 - -
Sto12g1303 538 PRINTS Preprotein translocase SecY subunit signature 255 280 - -
Sto12g1303 538 PRINTS Preprotein translocase SecY subunit signature 281 304 - -
Sto12g1303 538 PRINTS Preprotein translocase SecY subunit signature 372 391 - -
Sto12g1303 538 PRINTS Preprotein translocase SecY subunit signature 411 433 - -
Sto12g1303 538 PRINTS Preprotein translocase SecY subunit signature 466 484 - -
Sto12g1303 538 PRINTS Preprotein translocase SecY subunit signature 500 518 - -
Sto12g1303 538 SUPERFAMILY Preprotein translocase SecY subunit 123 521 IPR023201 -
Sto12g1303 538 Hamap Protein translocase subunit SecY [secY]. 119 531 IPR026593 -
Sto12g1303 538 ProSitePatterns Protein secY signature 2. 274 291 IPR030659 -
Sto12g1303 538 Pfam SecY 183 514 IPR002208 GO:0015031|GO:0016020
Sto12g1303 538 ProSitePatterns Protein secY signature 1. 182 201 IPR030659 -
Sto12g1303 538 TIGRFAM 3a0501s007: preprotein translocase, SecY subunit 130 527 IPR002208 GO:0015031|GO:0016020
Sto12g1303 538 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 49 536 IPR002208 GO:0015031|GO:0016020
Sto12g1303 538 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC 49 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1303 Sto-Chr12 8458296 8462550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1303 28 538 Chloroplast and Mitochondria Gene Families AT2G18710 80.897 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1303 K10956 - gmx:100810430 869.766