Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1273 ATGGAACAACACAAGGCAATGAAAGCTAGTTACTTTTCTTTTGTATCTCAAATGTTGGCCGTTTTTGTTCTTGCTCTTGTTCTGGGAAATACATGTTTTGCTTTTCccacatcttcttcttcatcggaCCCATATGTTGAACAACAACGAGACAAGGTCCGATGGTTGCCTGGTCAAACATTTAACATCAATTTTGCACACTACGCTGGTTATGTGACCATCAATGAGAAAGCTGGGAAGGCTCTCTTTTATTGGTTCATTGAAGCAGAGAAAAACCCTGAATCCAAACCTCTTGTTCTTTGGCTCAATGGAGGACCTGGATGTTCATCCATTGCTTATGGTGAGGCAGAGGAAATTGGGCCCTTTCAAGTTCAGTCAGATGGCAAGACCCTTTACCTAAATCCTTACTCTTGGAATCGAGTTGCCAACCTTCTTTTTGTTGATTCTCCTGTTGGAGTTGGATTTTCATATTCCAACACTTCCTCTGACCTCCTCAATAATGGCGATAAGAGCACTGCTAAGGATTCTCTGAAATTCCTATTGAAGTGGTTTGAGCGTTTTCCCCAATATAAAGGAAGAGACTTTTATATTGCTGGTGAAAGCTAtgcagGGCATTATATTCCTCAACTTAGCCAAGTTATTGTGAAGAACAATAGGAAAGCCAAAGAAGCTAAAACTATTAATCTGAAGGGCTATATGGTAGGAAATGGTGTAATGGATGATTATAATGATTACTTGGGGCTATCAGAGTTTATGTGGTCAAATGGTATGATTTCGGATGAAACATACCAAGAAATGAAGCTTAAATGTGATCACGAATCTTCCATGCATCCCAAAGCTCCATGTGAACAAGTTATAGAGAATGCTTATAATGAAATGGGGAATATTGATCCTTATAGTATCTTCACTCCTACATGCCGTCTTAATGTTAGTCAAATCAGCTTCAGGCTCAAAAGGAGGCATATGATTGGAAGATTGAGTAGGGAGTATGATCCTTGCACAGAGAAGCACTCAGTTGTGTACTTCAATCTACCTGAAGTCCAGAAGGCTCTTCATGTTAATCCTGATCATAAGCCTACTAAATGGGAATCTTGCAGTGATCTAGTATTTACCAACTGGAAGGATTCTCCATTGACAGTGCTGGATATTTATCGTGAACTTATTCCATTAGGACTGAGAATATGGGTGTTCAGTGGAGATACAGATGCTATAGTACCAGTGACATCCACGCGCTACAGTATAAATGCACTTCAACTTCCTACTGTGGGCCCCTGGCGTCCCTGGTATGATGATATGCAGGTGGGAGGATGGAGCCAAGAATATGAAGGATTGACATTTGTAGTAATAAGGGGAGCAGGACATGAAGTTCCTCTGCATACACCAAAACCTGCTCTTGCACTCATCACTGCCTTTCTTGCTGGCTCTTCCATGCCCTCTCTTCCTGCTTTACACTCTGCTTATTGA 1464 0.403 MEQHKAMKASYFSFVSQMLAVFVLALVLGNTCFAFPTSSSSSDPYVEQQRDKVRWLPGQTFNINFAHYAGYVTINEKAGKALFYWFIEAEKNPESKPLVLWLNGGPGCSSIAYGEAEEIGPFQVQSDGKTLYLNPYSWNRVANLLFVDSPVGVGFSYSNTSSDLLNNGDKSTAKDSLKFLLKWFERFPQYKGRDFYIAGESYAGHYIPQLSQVIVKNNRKAKEAKTINLKGYMVGNGVMDDYNDYLGLSEFMWSNGMISDETYQEMKLKCDHESSMHPKAPCEQVIENAYNEMGNIDPYSIFTPTCRLNVSQISFRLKRRHMIGRLSREYDPCTEKHSVVYFNLPEVQKALHVNPDHKPTKWESCSDLVFTNWKDSPLTVLDIYRELIPLGLRIWVFSGDTDAIVPVTSTRYSINALQLPTVGPWRPWYDDMQVGGWSQEYEGLTFVVIRGAGHEVPLHTPKPALALITAFLAGSSMPSLPALHSAY 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1273 487 Gene3D - 333 371 - -
Sto12g1273 487 ProSitePatterns Serine carboxypeptidases, histidine active site. 444 461 IPR033124 GO:0004185
Sto12g1273 487 ProSitePatterns Serine carboxypeptidases, serine active site. 197 204 IPR018202 GO:0004185
Sto12g1273 487 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 481 IPR001563 GO:0004185|GO:0006508
Sto12g1273 487 SUPERFAMILY alpha/beta-Hydrolases 53 476 IPR029058 -
Sto12g1273 487 Gene3D alpha/beta hydrolase 47 308 IPR029058 -
Sto12g1273 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 146 IPR001563 GO:0004185|GO:0006508
Sto12g1273 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 147 157 IPR001563 GO:0004185|GO:0006508
Sto12g1273 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 208 IPR001563 GO:0004185|GO:0006508
Sto12g1273 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 444 457 IPR001563 GO:0004185|GO:0006508
Sto12g1273 487 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 29 30 481 - -
Sto12g1273 487 Gene3D - 380 474 - -
Sto12g1273 487 Pfam Serine carboxypeptidase 57 473 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1273 Sto-Chr12 8210319 8213602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1273 343 477 Calmodulin-binding Proteins AT2G22960 25.000 1.95e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1273 K16297 - fve:101295740 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1273 12 8210319 8213602 Sto12g1273 12 8210319 8213602 ECH