Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1272 ATGCAACACATGGCAATGAAAGctacttccttttcttttgttcCTCAAATGTTAGCCATCCTTGTTCTTGTTCtgggaaatgcatgttttgcttTTGccacatcttcttcttcatcggaCCCATATGTTGAACAACAACGAGACAGGGTTCGATGGTTGCCTGGTCAGACATTTAACGTCGATTTCGCACACTATGCTGGTTATGTGACCATCAATGAGAAAGCTGGGAAGGCTCTCTTTTATTGGTTCATTGAAGCAGACAAAAACCCTGAATCCAAACCTCTTGTTCTTTGGCTCAATGGAGGACCTGGATGTTCATCCATCGCTTATGGTGAGGCAGAGGAAATTGGGCCCTTTCAGGTTCAGTCAGATGGCAAGACCCTTTACCTAAATCCTTACTCTTGGAATCGAGTTGCCAACATTCTTTTTGTTGATTCTCCTGTTGGAGTTGGATTTTCATATTCAAACACTACCTCTGATCTGCTCAACAATGGGGATAAGAGCACTGCTAAGGATTCTCTGAAATTCCTATTGAAGTGGTTTGAGCGTTTTCCCCAATATAAAGGAAGAGACTTTTATATTGCTGGTGAAAGCTATGCAGGGCATTATATTCCTCAACTTAGCCAAGTTATTGTGAAGAACAATAGGAAAGCCAAAGAAGCTAAAGCTATTAATTTGAAGGGATATATGGTAGGAAATGGTCTAATGGATGATTATAATGATTACTTGGGGCTATCGGAGTTTATGTGGTCAAATGGTATGATTTCGGATCAAACATACCAAGAAATGAAGCTTAAATGTGATCACGAATCTTTCATGCATCCCAAAACTGCATGTGAACAAGTCATAGAGAATGCTGATAAAGAAATGGGGAATATTGATCCTTACAGTATCTTCACTCCTACATGCCGTCTTAATGTTAGTCAAATAAGCCTCATGCTCAAAAGGAAGCCTTATGATCCTTGCACAGAGAAACACTCGGTTGTGTACTTCAATCTACCTGAGGTCCAAAAGGCTCTTCATGTTAATCCTGATCATAAGCCTCCTAAATGGGAGACTTGCAGTGATGTGGTATATAACAACTGGAAGGATTCTCCATTGACAGTGCTGGATATTTATCGTGAACTTATTCCTTTAGGTCTGCGAATTTGGGTGTTCAGTGGTGATACAGATGCTGTAGTACCGGTGACATCCACTCGCTACAGTATAGATGCGCTCAAACTTCCTACTGTGGGCCCATGGCGTCCTTGGTATGATGATATGCAGGTGGGAGGATGGAGCCAAGAATATGAAGGATTGACATTTGTAGTAGTGAGAGGAGCAGGACATGAAGTTCCTCTGCATACACCAAAACCAGCTCTTGCACTCATCACTGCCTTTCTTACTGCCTCTTCCATGCCCTCTCTTCCTGATTTACACTCTGCCATTTGA 1431 0.4011 MQHMAMKATSFSFVPQMLAILVLVLGNACFAFATSSSSSDPYVEQQRDRVRWLPGQTFNVDFAHYAGYVTINEKAGKALFYWFIEADKNPESKPLVLWLNGGPGCSSIAYGEAEEIGPFQVQSDGKTLYLNPYSWNRVANILFVDSPVGVGFSYSNTTSDLLNNGDKSTAKDSLKFLLKWFERFPQYKGRDFYIAGESYAGHYIPQLSQVIVKNNRKAKEAKAINLKGYMVGNGLMDDYNDYLGLSEFMWSNGMISDQTYQEMKLKCDHESFMHPKTACEQVIENADKEMGNIDPYSIFTPTCRLNVSQISLMLKRKPYDPCTEKHSVVYFNLPEVQKALHVNPDHKPPKWETCSDVVYNNWKDSPLTVLDIYRELIPLGLRIWVFSGDTDAVVPVTSTRYSIDALKLPTVGPWRPWYDDMQVGGWSQEYEGLTFVVVRGAGHEVPLHTPKPALALITAFLTASSMPSLPDLHSAI 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1272 476 ProSitePatterns Serine carboxypeptidases, histidine active site. 433 450 IPR033124 GO:0004185
Sto12g1272 476 Gene3D - 322 360 - -
Sto12g1272 476 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 22 469 IPR001563 GO:0004185|GO:0006508
Sto12g1272 476 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 29 22 469 - -
Sto12g1272 476 Gene3D - 369 462 - -
Sto12g1272 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Sto12g1272 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Sto12g1272 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Sto12g1272 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
Sto12g1272 476 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Sto12g1272 476 SUPERFAMILY alpha/beta-Hydrolases 50 462 IPR029058 -
Sto12g1272 476 Pfam Serine carboxypeptidase 54 462 IPR001563 GO:0004185|GO:0006508
Sto12g1272 476 Gene3D alpha/beta hydrolase 44 305 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1272 Sto-Chr12 8200206 8203911 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1272 332 457 Calmodulin-binding Proteins AT2G22960 27.559 3.38e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1272 K16297 - fve:101295740 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1272 12 8200206 8203911 Sto12g1272 12 8200206 8203911 ECH