Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1268 ATGTCGGTCGGCGTCCGCTGCTTAACGGTGCTCGGGGAATTTAAGCCGTTTGGCTTGATTGCTGAAGCTCTAGACGGAAAACCTTCCGATATAGTTACTGACAAGTACGATTATTTCCTTTTCGACCCTGAAGTCGCTCGAGACCGAGACGAGGAAGATAACTATGACGAGGCTGCTTCCGCATTGTGTAATCAGGGTGATCACGAGCTATTCATCAGAGGGAACCGGATTATATGGTCGACGGGTTCAAGGGTTTTTAAGAGATTTACTTTGCGTTCCCCTGTTGTTatgCAGGAGGTTGAAGCAAATATACCATCATCTGTTCCCTTTTCATCGTTGAGCCCTTTGCTAAGTACACGTGAGTCTTGGCGCCCAAGAAGAGAACTTGGTCACAGTCCACAACATTGTTTTAGTCCCTTTTCTGCACTCAATCATATCCAAAAGGGAGAGGCGACTTCAATATCATCACATCTCATTTTCATGGATACTCTGGATGAACAACAACCAACTTTTATTGAAGAAAGAGGGAAATTGAACATAATGAAGGAATATGATGAAAAGACAATTTGGACAAGTGATCTGGTCCCTCTTATGGCATCCTATAATAAAGGAAAGATGCAGCACTCTCTGTGGGTTGCAGAAATCATTAGTTCTAACCTTGATGAAGTAGACACCAGTTTATTAAATGTAGATCCTGCAGGTGTAGTGCCGAAATATTTGTCCTTCGTAGAATATGGCCAGGAAAAGGTGCCCATACAGCTGCTTGTTTTCATGGCTACTGATGATGATGCAGCTCCTTTGGTCTGCTTTCTTTACCAAGAACAGAGAAAATTGTTATCTGTGAGGCTTCAGAGTgttgaaataaataatgaagTTTCCTTTGACGTTAAACCTGATATGAGCTGGAGCATACCTGCAATTTCAGCTTCACCTGTGATTGTAACTCAGCCAAGAGTGAAAGTTGGACCGCTGCCATATTCAGACATTTTGGTTTTAGCTCCAGAAAATGTTCTGCATCTCTATGGAGTTATGGAGGCAATTAGGATAAGTTGTGCTGGATATCCCACTAGAAAAACCTTCGATGAATTTGTGGATCGATTTGGCCTTCTTGCACCTGAAGCTTTGGATGGAAGTTCTGATGAGGTCACTGCTTGCAAGAGGATTCTAGAGAAGGTTGGACTTAAAGGCTACCAGATTGGTAAAACAAAGGTATTTCTTCGAGCTGGTCAAATGGCAGAACTAGATACCCGTAGAAGCGAGATCTTAGGAAAGTCAGCAAGCATTATTCAGAGGAAAAGCCAATGCCGGAAATACTTGGCAAAACTTCACTTTAGGAAGTTAAAGAAAGCCACTATTACAACACAATGTGCATGGAGAGGAAAAATTGCCCGGCGAGAATTGCGGAAACTCAAGatgGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAGGTTGAAGACCTTACATTGAGGTTGCAGCTGGAGAAACGCATGAGGTTTAAAGAAACTAAGGCATTGCTTGAAAAGGAGCGTGAGGCTGCGAAGAGGGCAGCAGAGATTGTGCCAATCATAAAGGAGGTTCCAGTCATTGACCATGCATTGTTGGAGAAGCTTACTAGTGAAAATGAGAAACTCAAGACCCTGGTGTGTTCACTGGAAAAGAAAATTGGTGAAACGGAAAAGAGGTATGAAAAGGCAAACAAAATTAGTGAAGAAAGGTTGAAGCAAGCTATGGAGGCAGAATCAAAAATAATTCAGTTGAAGACTTCCATGCAAAGGCTTGAAGAGAAGTTCTCAAATATTGAATCTGAAAACCAAGTTCTGCAGTACCAACCTCTGAGAAACCCATCTGTTAAAAAGATGTCTGAGCACCTCTCTATAACTGTAGCTGAGAAGCAGGAAAATGGTCACCCTGAGGTAGAAGAGCATAAAGCTGGTGCGAGTACTATTACTGCATTTTCTCAGCACATGGCGCTGTCAGTTTTGTTCATTGAACATGTGACCTCTGTACTTAGCCAGACGCCTATCCTCAAAGGTGATGTAGATAGAGTTGAGGATAGCCATGTTTTTGACAGTCAGACAGAAGATGCTGCATTTGTATTGCCAAGTCGTGAAGCTATGTGTCTGGGAGATAGGGTAATAATGTATCTTCCACGTTGTATGGACACGAATTCTGAAGTTAGAAAGATATCTGCTCAAGCGTTAGATAAGTGTCGAGATTCTCCTCCCAATGACTGGCCATCGGCTGCTTATGTCCTTCTTGGTCGACAAGATTTGGCAATGTCATCTTTGACTCGTGAATGCAAGTATAGGGAAATTGAAAGACCAACCAATGTGAATGTAATCTCTATGTCTACGCCTTATATGCTGAACCTGCATCCAGTGACAATATCTTCTACTATTTCTGATGCAATTGGGTTGGAAGGTACAAAGTTTGAGGATACAGGTTCAATTGGTAAAACAAAGGTATTTCTTCGAGCTGGTCAAATGGCAGAACTAGATACCCGTAGAAGCGAGATCTTAGGAAAGTCAGCAAGCATTATTCAGAGGAAAAGCCAATGCCGGAAATACTTGGCAAAACTTCACTTTAGGAAGTTAAAGAAAGCCACTATTACAACACAATGTGCATGGAGAGGAAAAATTGCCCGGCGAGAATTGCGGAAACTCAAGatgGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAGGTTGAAGACCTTACATTGAGGTTGCAGCTGGAGAAACGCATGAGGGTTGACATGGAAGAAGCCAAaacacaagaaaataaaatattacagtCTTCTTTGCATGAGATTCAACTTCAGTTTAAAGAAACTAAGGCATTGCTTGAAAAGGAGCGTGAGGCTGCGAAGAGGGCAGCAGAGATTGTGCCAAGCATAAAGGAGGTTCCAGTCATTGACCATGCATTGTTGGAGAAGCTTACTAGCGAAAATGAGAAACTCAAGGTGAGACCCTGGTGTGTTCACTGGAAAAGAAAATTGGTGAAACGGAAAAGAGGTATGAAGAGGCAAACAAAATTAGTGGAGAAAGGTTGA 3093 0.4197 MSVGVRCLTVLGEFKPFGLIAEALDGKPSDIVTDKYDYFLFDPEVARDRDEEDNYDEAASALCNQGDHELFIRGNRIIWSTGSRVFKRFTLRSPVVMQEVEANIPSSVPFSSLSPLLSTRESWRPRRELGHSPQHCFSPFSALNHIQKGEATSISSHLIFMDTLDEQQPTFIEERGKLNIMKEYDEKTIWTSDLVPLMASYNKGKMQHSLWVAEIISSNLDEVDTSLLNVDPAGVVPKYLSFVEYGQEKVPIQLLVFMATDDDAAPLVCFLYQEQRKLLSVRLQSVEINNEVSFDVKPDMSWSIPAISASPVIVTQPRVKVGPLPYSDILVLAPENVLHLYGVMEAIRISCAGYPTRKTFDEFVDRFGLLAPEALDGSSDEVTACKRILEKVGLKGYQIGKTKVFLRAGQMAELDTRRSEILGKSASIIQRKSQCRKYLAKLHFRKLKKATITTQCAWRGKIARRELRKLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRMRFKETKALLEKEREAAKRAAEIVPIIKEVPVIDHALLEKLTSENEKLKTLVCSLEKKIGETEKRYEKANKISEERLKQAMEAESKIIQLKTSMQRLEEKFSNIESENQVLQYQPLRNPSVKKMSEHLSITVAEKQENGHPEVEEHKAGASTITAFSQHMALSVLFIEHVTSVLSQTPILKGDVDRVEDSHVFDSQTEDAAFVLPSREAMCLGDRVIMYLPRCMDTNSEVRKISAQALDKCRDSPPNDWPSAAYVLLGRQDLAMSSLTRECKYREIERPTNVNVISMSTPYMLNLHPVTISSTISDAIGLEGTKFEDTGSIGKTKVFLRAGQMAELDTRRSEILGKSASIIQRKSQCRKYLAKLHFRKLKKATITTQCAWRGKIARRELRKLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRMRVDMEEAKTQENKILQSSLHEIQLQFKETKALLEKEREAAKRAAEIVPSIKEVPVIDHALLEKLTSENEKLKVRPWCVHWKRKLVKRKRGMKRQTKLVEKG 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1268 1030 Pfam IQ calmodulin-binding motif 449 468 IPR000048 GO:0005515
Sto12g1268 1030 Pfam IQ calmodulin-binding motif 874 893 IPR000048 GO:0005515
Sto12g1268 1030 Gene3D - 353 420 - -
Sto12g1268 1030 Pfam Anaphase-promoting complex subunit 1 WD40 beta-propeller domain 102 220 IPR024990 GO:0005680
Sto12g1268 1030 PANTHER MYOSIN-6 340 432 - -
Sto12g1268 1030 PANTHER MYOSIN-6 432 649 - -
Sto12g1268 1030 PANTHER MYOSIN-6 857 959 - -
Sto12g1268 1030 PANTHER MYOSIN-6 823 857 - -
Sto12g1268 1030 SMART iq_5 446 468 IPR000048 GO:0005515
Sto12g1268 1030 SMART iq_5 846 870 IPR000048 GO:0005515
Sto12g1268 1030 SMART iq_5 421 445 IPR000048 GO:0005515
Sto12g1268 1030 SMART iq_5 871 893 IPR000048 GO:0005515
Sto12g1268 1030 Coils Coil 566 617 - -
Sto12g1268 1030 Coils Coil 470 523 - -
Sto12g1268 1030 Gene3D - 422 475 - -
Sto12g1268 1030 Gene3D - 847 900 - -
Sto12g1268 1030 ProSiteProfiles Myosin motor domain profile. 342 419 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto12g1268 1030 ProSiteProfiles IQ motif profile. 447 476 IPR000048 GO:0005515
Sto12g1268 1030 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 804 905 IPR027417 -
Sto12g1268 1030 Gene3D - 783 842 - -
Sto12g1268 1030 ProSiteProfiles IQ motif profile. 872 901 IPR000048 GO:0005515
Sto12g1268 1030 Coils Coil 948 968 - -
Sto12g1268 1030 Pfam Myosin head (motor domain) 338 407 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto12g1268 1030 Coils Coil 895 929 - -
Sto12g1268 1030 PANTHER MYOSIN 340 432 - -
Sto12g1268 1030 PANTHER MYOSIN 823 857 - -
Sto12g1268 1030 PANTHER MYOSIN 857 959 - -
Sto12g1268 1030 PANTHER MYOSIN 432 649 - -
Sto12g1268 1030 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 338 480 IPR027417 -
Sto12g1268 1030 SMART MYSc_2a 100 420 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1268 Sto-Chr12 8164306 8173787 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1268 809 910 Myosins gene family AT1G04160 49.020 1.84e-16 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1268 K03348 - zju:107413881 442.195